Gene : Medtr1g062330 M. truncatula Mt4.0v1
Defline:  (1 of 11) PTHR24098:SF5 - ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN Description:  RING/FYVE/PHD zinc finger protein
Genomic Order:  3295 Name:  ? Medtr1g062330
Secondary Identifier:  ? PAC:31093237
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g062330 0.5kb upstream 0.5kb upstream 11210 true chr1: 27195314-27206523 Medicago truncatula
Medtr1g062330 0.5kb upstream 0.5kb upstream 500 false chr1: 27195314-27195813 Medicago truncatula
Medtr1g062330 0.5kb downstream 0.5kb downstream 11210 true chr1: 27195814-27207023 Medicago truncatula
Medtr1g062330 0.5kb downstream 0.5kb downstream 500 false chr1: 27206524-27207023 Medicago truncatula
Medtr1g062330 1.0kb upstream 1.0kb upstream 11710 true chr1: 27194814-27206523 Medicago truncatula
Medtr1g062330 1.0kb upstream 1.0kb upstream 1000 false chr1: 27194814-27195813 Medicago truncatula
Medtr1g062330 1.0kb downstream 1.0kb downstream 11710 true chr1: 27195814-27207523 Medicago truncatula
Medtr1g062330 1.0kb downstream 1.0kb downstream 1000 false chr1: 27206524-27207523 Medicago truncatula
Medtr1g062330 2.0kb upstream 2.0kb upstream 12710 true chr1: 27193814-27206523 Medicago truncatula
Medtr1g062330 2.0kb upstream 2.0kb upstream 2000 false chr1: 27193814-27195813 Medicago truncatula
Medtr1g062330 2.0kb downstream 2.0kb downstream 12710 true chr1: 27195814-27208523 Medicago truncatula
Medtr1g062330 2.0kb downstream 2.0kb downstream 2000 false chr1: 27206524-27208523 Medicago truncatula
Medtr1g062330 5.0kb upstream 5.0kb upstream 15710 true chr1: 27190814-27206523 Medicago truncatula
Medtr1g062330 5.0kb upstream 5.0kb upstream 5000 false chr1: 27190814-27195813 Medicago truncatula
Medtr1g062330 5.0kb downstream 5.0kb downstream 15710 true chr1: 27195814-27211523 Medicago truncatula
Medtr1g062330 5.0kb downstream 5.0kb downstream 5000 false chr1: 27206524-27211523 Medicago truncatula
Medtr1g062330 10.0kb upstream 10.0kb upstream 20710 true chr1: 27185814-27206523 Medicago truncatula
Medtr1g062330 10.0kb upstream 10.0kb upstream 10000 false chr1: 27185814-27195813 Medicago truncatula
Medtr1g062330 10.0kb downstream 10.0kb downstream 20710 true chr1: 27195814-27216523 Medicago truncatula
Medtr1g062330 10.0kb downstream 10.0kb downstream 10000 false chr1: 27206524-27216523 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296901 5265 Fabidae View MSA
124068240 5270 Rosid View MSA
123753640 5271 Pentapetalae View MSA
122796648 5272 Eudicot View MSA
122050898 5273 Angiosperm View MSA
121351041 5274 Embryophyte View MSA
123425735 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.493        
cufflinks 2.396        
cufflinks 5.103       High
cufflinks 0.988        
cufflinks 3.559        
cufflinks 0.452       Low
cufflinks 1.614        
cufflinks 3.687        
cufflinks 1.184        

0 Strain