Gene : Medtr1g062430 M. truncatula Mt4.0v1
Defline:  (1 of 15) 6.3.1.2 - Glutamate--ammonia ligase / Glutamine synthetase Description:  glutamine synthetase domain protein
Genomic Order:  3303 Name:  ? Medtr1g062430
Secondary Identifier:  ? PAC:31098154
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula GLNSYN-PWY Medicago truncatula pathologic  
Mtruncatula PWY-3282 Medicago truncatula pathologic  
Mtruncatula PWY-381 Medicago truncatula pathologic  
Mtruncatula PWY-6549 Medicago truncatula pathologic  
Mtruncatula PWY-6963 Medicago truncatula pathologic  
Mtruncatula PWY-6964 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g062430 0.5kb upstream 0.5kb upstream 3458 true chr1: 27251749-27255206 Medicago truncatula
Medtr1g062430 0.5kb upstream 0.5kb upstream 500 false chr1: 27254707-27255206 Medicago truncatula
Medtr1g062430 0.5kb downstream 0.5kb downstream 3458 true chr1: 27251249-27254706 Medicago truncatula
Medtr1g062430 0.5kb downstream 0.5kb downstream 500 false chr1: 27251249-27251748 Medicago truncatula
Medtr1g062430 1.0kb upstream 1.0kb upstream 3958 true chr1: 27251749-27255706 Medicago truncatula
Medtr1g062430 1.0kb upstream 1.0kb upstream 1000 false chr1: 27254707-27255706 Medicago truncatula
Medtr1g062430 1.0kb downstream 1.0kb downstream 3958 true chr1: 27250749-27254706 Medicago truncatula
Medtr1g062430 1.0kb downstream 1.0kb downstream 1000 false chr1: 27250749-27251748 Medicago truncatula
Medtr1g062430 2.0kb upstream 2.0kb upstream 4958 true chr1: 27251749-27256706 Medicago truncatula
Medtr1g062430 2.0kb upstream 2.0kb upstream 2000 false chr1: 27254707-27256706 Medicago truncatula
Medtr1g062430 2.0kb downstream 2.0kb downstream 4958 true chr1: 27249749-27254706 Medicago truncatula
Medtr1g062430 2.0kb downstream 2.0kb downstream 2000 false chr1: 27249749-27251748 Medicago truncatula
Medtr1g062430 5.0kb upstream 5.0kb upstream 7958 true chr1: 27251749-27259706 Medicago truncatula
Medtr1g062430 5.0kb upstream 5.0kb upstream 5000 false chr1: 27254707-27259706 Medicago truncatula
Medtr1g062430 5.0kb downstream 5.0kb downstream 7958 true chr1: 27246749-27254706 Medicago truncatula
Medtr1g062430 5.0kb downstream 5.0kb downstream 5000 false chr1: 27246749-27251748 Medicago truncatula
Medtr1g062430 10.0kb upstream 10.0kb upstream 12958 true chr1: 27251749-27264706 Medicago truncatula
Medtr1g062430 10.0kb upstream 10.0kb upstream 10000 false chr1: 27254707-27264706 Medicago truncatula
Medtr1g062430 10.0kb downstream 10.0kb downstream 12958 true chr1: 27241749-27254706 Medicago truncatula
Medtr1g062430 10.0kb downstream 10.0kb downstream 10000 false chr1: 27241749-27251748 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122289477 5265 Fabidae View MSA
124062784 5270 Rosid View MSA
123749163 5271 Pentapetalae View MSA
122791802 5272 Eudicot View MSA
122046045 5273 Angiosperm View MSA
121348529 5274 Embryophyte View MSA
123428524 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.043     Low High
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  

0 Strain