Gene : Medtr1g063380 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR23077:SF82 - CELL DIVISION CONTROL PROTEIN 48 HOMOLOG D Description:  ATPase, AAA-type, CDC48 protein
Genomic Order:  3367 Name:  ? Medtr1g063380
Secondary Identifier:  ? PAC:31099613
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g063380 0.5kb upstream 0.5kb upstream 5166 true chr1: 27974815-27979980 Medicago truncatula
Medtr1g063380 0.5kb upstream 0.5kb upstream 500 false chr1: 27974815-27975314 Medicago truncatula
Medtr1g063380 0.5kb downstream 0.5kb downstream 5166 true chr1: 27975315-27980480 Medicago truncatula
Medtr1g063380 0.5kb downstream 0.5kb downstream 500 false chr1: 27979981-27980480 Medicago truncatula
Medtr1g063380 1.0kb upstream 1.0kb upstream 5666 true chr1: 27974315-27979980 Medicago truncatula
Medtr1g063380 1.0kb upstream 1.0kb upstream 1000 false chr1: 27974315-27975314 Medicago truncatula
Medtr1g063380 1.0kb downstream 1.0kb downstream 5666 true chr1: 27975315-27980980 Medicago truncatula
Medtr1g063380 1.0kb downstream 1.0kb downstream 1000 false chr1: 27979981-27980980 Medicago truncatula
Medtr1g063380 2.0kb upstream 2.0kb upstream 6666 true chr1: 27973315-27979980 Medicago truncatula
Medtr1g063380 2.0kb upstream 2.0kb upstream 2000 false chr1: 27973315-27975314 Medicago truncatula
Medtr1g063380 2.0kb downstream 2.0kb downstream 6666 true chr1: 27975315-27981980 Medicago truncatula
Medtr1g063380 2.0kb downstream 2.0kb downstream 2000 false chr1: 27979981-27981980 Medicago truncatula
Medtr1g063380 5.0kb upstream 5.0kb upstream 9666 true chr1: 27970315-27979980 Medicago truncatula
Medtr1g063380 5.0kb upstream 5.0kb upstream 5000 false chr1: 27970315-27975314 Medicago truncatula
Medtr1g063380 5.0kb downstream 5.0kb downstream 9666 true chr1: 27975315-27984980 Medicago truncatula
Medtr1g063380 5.0kb downstream 5.0kb downstream 5000 false chr1: 27979981-27984980 Medicago truncatula
Medtr1g063380 10.0kb upstream 10.0kb upstream 14666 true chr1: 27965315-27979980 Medicago truncatula
Medtr1g063380 10.0kb upstream 10.0kb upstream 10000 false chr1: 27965315-27975314 Medicago truncatula
Medtr1g063380 10.0kb downstream 10.0kb downstream 14666 true chr1: 27975315-27989980 Medicago truncatula
Medtr1g063380 10.0kb downstream 10.0kb downstream 10000 false chr1: 27979981-27989980 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311654 5265 Fabidae View MSA
124066929 5270 Rosid View MSA
123746983 5271 Pentapetalae View MSA
122795799 5272 Eudicot View MSA
122048605 5273 Angiosperm View MSA
121347913 5274 Embryophyte View MSA
123424841 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 109.688     High  
cufflinks 111.524     High  
cufflinks 92.96     High  
cufflinks 95.784     High  
cufflinks 120.79     High  
cufflinks 42.087     High Low
cufflinks 88.227     High  
cufflinks 98.623     High  
cufflinks 161.75     High High

0 Strain