Gene : Medtr1g047210 M. truncatula Mt4.0v1
Defline:  (1 of 3) 2.3.1.16 - Acetyl-CoA C-acyltransferase / Beta-ketothiolase Description:  3-ketoacyl-CoA thiolase 2, peroxisomal-like protein
Genomic Order:  2344 Name:  ? Medtr1g047210
Secondary Identifier:  ? PAC:31097928
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5136 Medicago truncatula pathologic  
Mtruncatula PWY-561 Medicago truncatula pathologic  
Mtruncatula PWY-6435 Medicago truncatula pathologic  
Mtruncatula PWY-735 Medicago truncatula pathologic  
Mtruncatula PWY-7606 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g047210 0.5kb upstream 0.5kb upstream 5604 true chr1: 17818008-17823611 Medicago truncatula
Medtr1g047210 0.5kb upstream 0.5kb upstream 500 false chr1: 17823112-17823611 Medicago truncatula
Medtr1g047210 0.5kb downstream 0.5kb downstream 5604 true chr1: 17817508-17823111 Medicago truncatula
Medtr1g047210 0.5kb downstream 0.5kb downstream 500 false chr1: 17817508-17818007 Medicago truncatula
Medtr1g047210 1.0kb upstream 1.0kb upstream 6104 true chr1: 17818008-17824111 Medicago truncatula
Medtr1g047210 1.0kb upstream 1.0kb upstream 1000 false chr1: 17823112-17824111 Medicago truncatula
Medtr1g047210 1.0kb downstream 1.0kb downstream 6104 true chr1: 17817008-17823111 Medicago truncatula
Medtr1g047210 1.0kb downstream 1.0kb downstream 1000 false chr1: 17817008-17818007 Medicago truncatula
Medtr1g047210 2.0kb upstream 2.0kb upstream 7104 true chr1: 17818008-17825111 Medicago truncatula
Medtr1g047210 2.0kb upstream 2.0kb upstream 2000 false chr1: 17823112-17825111 Medicago truncatula
Medtr1g047210 2.0kb downstream 2.0kb downstream 7104 true chr1: 17816008-17823111 Medicago truncatula
Medtr1g047210 2.0kb downstream 2.0kb downstream 2000 false chr1: 17816008-17818007 Medicago truncatula
Medtr1g047210 5.0kb upstream 5.0kb upstream 10104 true chr1: 17818008-17828111 Medicago truncatula
Medtr1g047210 5.0kb upstream 5.0kb upstream 5000 false chr1: 17823112-17828111 Medicago truncatula
Medtr1g047210 5.0kb downstream 5.0kb downstream 10104 true chr1: 17813008-17823111 Medicago truncatula
Medtr1g047210 5.0kb downstream 5.0kb downstream 5000 false chr1: 17813008-17818007 Medicago truncatula
Medtr1g047210 10.0kb upstream 10.0kb upstream 15104 true chr1: 17818008-17833111 Medicago truncatula
Medtr1g047210 10.0kb upstream 10.0kb upstream 10000 false chr1: 17823112-17833111 Medicago truncatula
Medtr1g047210 10.0kb downstream 10.0kb downstream 15104 true chr1: 17808008-17823111 Medicago truncatula
Medtr1g047210 10.0kb downstream 10.0kb downstream 10000 false chr1: 17808008-17818007 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307344 5265 Fabidae View MSA
124065110 5270 Rosid View MSA
123750766 5271 Pentapetalae View MSA
122786071 5272 Eudicot View MSA
122045703 5273 Angiosperm View MSA
121347485 5274 Embryophyte View MSA
123424542 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 32.961     High  
cufflinks 42.014     High  
cufflinks 59.021     High  
cufflinks 96.783     High High
cufflinks 33.327     High  
cufflinks 28.458     High Low
cufflinks 59.036     High  
cufflinks 46.159     High  
cufflinks 50.272     High  

0 Strain