Gene : Medtr1g047390 M. truncatula Mt4.0v1
Defline:  (1 of 2) 3.6.1.19 - Nucleoside-triphosphate diphosphatase / Nucleoside-triphosphate pyrophosphatase Description:  inosine triphosphate pyrophosphatase
Genomic Order:  2353 Name:  ? Medtr1g047390
Secondary Identifier:  ? PAC:31096178
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6545 Medicago truncatula pathologic  
Mtruncatula PWY-7184 Medicago truncatula pathologic  
Mtruncatula PWY-7206 Medicago truncatula pathologic  
Mtruncatula PWY-7211 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g047390 0.5kb upstream 0.5kb upstream 6299 true chr1: 17926445-17932743 Medicago truncatula
Medtr1g047390 0.5kb upstream 0.5kb upstream 500 false chr1: 17926445-17926944 Medicago truncatula
Medtr1g047390 0.5kb downstream 0.5kb downstream 6299 true chr1: 17926945-17933243 Medicago truncatula
Medtr1g047390 0.5kb downstream 0.5kb downstream 500 false chr1: 17932744-17933243 Medicago truncatula
Medtr1g047390 1.0kb upstream 1.0kb upstream 6799 true chr1: 17925945-17932743 Medicago truncatula
Medtr1g047390 1.0kb upstream 1.0kb upstream 1000 false chr1: 17925945-17926944 Medicago truncatula
Medtr1g047390 1.0kb downstream 1.0kb downstream 6799 true chr1: 17926945-17933743 Medicago truncatula
Medtr1g047390 1.0kb downstream 1.0kb downstream 1000 false chr1: 17932744-17933743 Medicago truncatula
Medtr1g047390 2.0kb upstream 2.0kb upstream 7799 true chr1: 17924945-17932743 Medicago truncatula
Medtr1g047390 2.0kb upstream 2.0kb upstream 2000 false chr1: 17924945-17926944 Medicago truncatula
Medtr1g047390 2.0kb downstream 2.0kb downstream 7799 true chr1: 17926945-17934743 Medicago truncatula
Medtr1g047390 2.0kb downstream 2.0kb downstream 2000 false chr1: 17932744-17934743 Medicago truncatula
Medtr1g047390 5.0kb upstream 5.0kb upstream 10799 true chr1: 17921945-17932743 Medicago truncatula
Medtr1g047390 5.0kb upstream 5.0kb upstream 5000 false chr1: 17921945-17926944 Medicago truncatula
Medtr1g047390 5.0kb downstream 5.0kb downstream 10799 true chr1: 17926945-17937743 Medicago truncatula
Medtr1g047390 5.0kb downstream 5.0kb downstream 5000 false chr1: 17932744-17937743 Medicago truncatula
Medtr1g047390 10.0kb upstream 10.0kb upstream 15799 true chr1: 17916945-17932743 Medicago truncatula
Medtr1g047390 10.0kb upstream 10.0kb upstream 10000 false chr1: 17916945-17926944 Medicago truncatula
Medtr1g047390 10.0kb downstream 10.0kb downstream 15799 true chr1: 17926945-17942743 Medicago truncatula
Medtr1g047390 10.0kb downstream 10.0kb downstream 10000 false chr1: 17932744-17942743 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303585 5265 Fabidae View MSA
124065206 5270 Rosid View MSA
123737786 5271 Pentapetalae View MSA
122787443 5272 Eudicot View MSA
122044439 5273 Angiosperm View MSA
121346203 5274 Embryophyte View MSA
123426243 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.037        
cufflinks 1.107        
cufflinks 1.164        
cufflinks 0.985        
cufflinks 1.622        
cufflinks 0.392       Low
cufflinks 2.132       High
cufflinks 0.909        
cufflinks 1.77        

0 Strain