Gene : Medtr1g046480 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10383:SF23 - SERINC-DOMAIN CONTAINING SERINE AND SPHINGOLIPID BIOSYNTHESIS PROTEIN Description:  TMS membrane protein/tumor differentially protein
Genomic Order:  2293 Name:  ? Medtr1g046480
Secondary Identifier:  ? PAC:31094956
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g046480 0.5kb upstream 0.5kb upstream 4853 true chr1: 17516799-17521651 Medicago truncatula
Medtr1g046480 0.5kb upstream 0.5kb upstream 500 false chr1: 17516799-17517298 Medicago truncatula
Medtr1g046480 0.5kb downstream 0.5kb downstream 4853 true chr1: 17517299-17522151 Medicago truncatula
Medtr1g046480 0.5kb downstream 0.5kb downstream 500 false chr1: 17521652-17522151 Medicago truncatula
Medtr1g046480 1.0kb upstream 1.0kb upstream 5353 true chr1: 17516299-17521651 Medicago truncatula
Medtr1g046480 1.0kb upstream 1.0kb upstream 1000 false chr1: 17516299-17517298 Medicago truncatula
Medtr1g046480 1.0kb downstream 1.0kb downstream 5353 true chr1: 17517299-17522651 Medicago truncatula
Medtr1g046480 1.0kb downstream 1.0kb downstream 1000 false chr1: 17521652-17522651 Medicago truncatula
Medtr1g046480 2.0kb upstream 2.0kb upstream 6353 true chr1: 17515299-17521651 Medicago truncatula
Medtr1g046480 2.0kb upstream 2.0kb upstream 2000 false chr1: 17515299-17517298 Medicago truncatula
Medtr1g046480 2.0kb downstream 2.0kb downstream 6353 true chr1: 17517299-17523651 Medicago truncatula
Medtr1g046480 2.0kb downstream 2.0kb downstream 2000 false chr1: 17521652-17523651 Medicago truncatula
Medtr1g046480 5.0kb upstream 5.0kb upstream 9353 true chr1: 17512299-17521651 Medicago truncatula
Medtr1g046480 5.0kb upstream 5.0kb upstream 5000 false chr1: 17512299-17517298 Medicago truncatula
Medtr1g046480 5.0kb downstream 5.0kb downstream 9353 true chr1: 17517299-17526651 Medicago truncatula
Medtr1g046480 5.0kb downstream 5.0kb downstream 5000 false chr1: 17521652-17526651 Medicago truncatula
Medtr1g046480 10.0kb upstream 10.0kb upstream 14353 true chr1: 17507299-17521651 Medicago truncatula
Medtr1g046480 10.0kb upstream 10.0kb upstream 10000 false chr1: 17507299-17517298 Medicago truncatula
Medtr1g046480 10.0kb downstream 10.0kb downstream 14353 true chr1: 17517299-17531651 Medicago truncatula
Medtr1g046480 10.0kb downstream 10.0kb downstream 10000 false chr1: 17521652-17531651 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305261 5265 Fabidae View MSA
124063610 5270 Rosid View MSA
123751443 5271 Pentapetalae View MSA
122793725 5272 Eudicot View MSA
122046221 5273 Angiosperm View MSA
121344586 5274 Embryophyte View MSA
123424460 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.027     Low  
cufflinks 0.003     Low Low
cufflinks 0.112     Low  
cufflinks 0.165       High
cufflinks 0.01     Low  
cufflinks 0.26       High

0 Strain