Gene : Medtr1g048610 M. truncatula Mt4.0v1
Defline:  (1 of 209) PF00847 - AP2 domain (AP2) Description:  ethylene response factor
Genomic Order:  2440 Name:  ? Medtr1g048610
Secondary Identifier:  ? PAC:31100040
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g048610 0.5kb upstream 0.5kb upstream 1901 true chr1: 18708193-18710093 Medicago truncatula
Medtr1g048610 0.5kb upstream 0.5kb upstream 500 false chr1: 18709594-18710093 Medicago truncatula
Medtr1g048610 0.5kb downstream 0.5kb downstream 1901 true chr1: 18707693-18709593 Medicago truncatula
Medtr1g048610 0.5kb downstream 0.5kb downstream 500 false chr1: 18707693-18708192 Medicago truncatula
Medtr1g048610 1.0kb upstream 1.0kb upstream 2401 true chr1: 18708193-18710593 Medicago truncatula
Medtr1g048610 1.0kb upstream 1.0kb upstream 1000 false chr1: 18709594-18710593 Medicago truncatula
Medtr1g048610 1.0kb downstream 1.0kb downstream 2401 true chr1: 18707193-18709593 Medicago truncatula
Medtr1g048610 1.0kb downstream 1.0kb downstream 1000 false chr1: 18707193-18708192 Medicago truncatula
Medtr1g048610 2.0kb upstream 2.0kb upstream 3401 true chr1: 18708193-18711593 Medicago truncatula
Medtr1g048610 2.0kb upstream 2.0kb upstream 2000 false chr1: 18709594-18711593 Medicago truncatula
Medtr1g048610 2.0kb downstream 2.0kb downstream 3401 true chr1: 18706193-18709593 Medicago truncatula
Medtr1g048610 2.0kb downstream 2.0kb downstream 2000 false chr1: 18706193-18708192 Medicago truncatula
Medtr1g048610 5.0kb upstream 5.0kb upstream 6401 true chr1: 18708193-18714593 Medicago truncatula
Medtr1g048610 5.0kb upstream 5.0kb upstream 5000 false chr1: 18709594-18714593 Medicago truncatula
Medtr1g048610 5.0kb downstream 5.0kb downstream 6401 true chr1: 18703193-18709593 Medicago truncatula
Medtr1g048610 5.0kb downstream 5.0kb downstream 5000 false chr1: 18703193-18708192 Medicago truncatula
Medtr1g048610 10.0kb upstream 10.0kb upstream 11401 true chr1: 18708193-18719593 Medicago truncatula
Medtr1g048610 10.0kb upstream 10.0kb upstream 10000 false chr1: 18709594-18719593 Medicago truncatula
Medtr1g048610 10.0kb downstream 10.0kb downstream 11401 true chr1: 18698193-18709593 Medicago truncatula
Medtr1g048610 10.0kb downstream 10.0kb downstream 10000 false chr1: 18698193-18708192 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314182 5265 Fabidae View MSA
124063509 5270 Rosid View MSA
123746238 5271 Pentapetalae View MSA
122796887 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 51.838     High High
cufflinks 24.755     High  
cufflinks 22.409     High  
cufflinks 30.587     High  
cufflinks 35.61     High  
cufflinks 10.035       Low
cufflinks 21.168     High  
cufflinks 19.256     High  
cufflinks 19.529     High  

0 Strain