Gene : Medtr1g048060 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  2389
Name:  ? Medtr1g048060 Secondary Identifier:  ? PAC:31094972
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g048060 0.5kb upstream 0.5kb upstream 1932 true chr1: 18187976-18189907 Medicago truncatula
Medtr1g048060 0.5kb upstream 0.5kb upstream 500 false chr1: 18187976-18188475 Medicago truncatula
Medtr1g048060 0.5kb downstream 0.5kb downstream 1932 true chr1: 18188476-18190407 Medicago truncatula
Medtr1g048060 0.5kb downstream 0.5kb downstream 500 false chr1: 18189908-18190407 Medicago truncatula
Medtr1g048060 1.0kb upstream 1.0kb upstream 2432 true chr1: 18187476-18189907 Medicago truncatula
Medtr1g048060 1.0kb upstream 1.0kb upstream 1000 false chr1: 18187476-18188475 Medicago truncatula
Medtr1g048060 1.0kb downstream 1.0kb downstream 2432 true chr1: 18188476-18190907 Medicago truncatula
Medtr1g048060 1.0kb downstream 1.0kb downstream 1000 false chr1: 18189908-18190907 Medicago truncatula
Medtr1g048060 2.0kb upstream 2.0kb upstream 3432 true chr1: 18186476-18189907 Medicago truncatula
Medtr1g048060 2.0kb upstream 2.0kb upstream 2000 false chr1: 18186476-18188475 Medicago truncatula
Medtr1g048060 2.0kb downstream 2.0kb downstream 3432 true chr1: 18188476-18191907 Medicago truncatula
Medtr1g048060 2.0kb downstream 2.0kb downstream 2000 false chr1: 18189908-18191907 Medicago truncatula
Medtr1g048060 5.0kb upstream 5.0kb upstream 6432 true chr1: 18183476-18189907 Medicago truncatula
Medtr1g048060 5.0kb upstream 5.0kb upstream 5000 false chr1: 18183476-18188475 Medicago truncatula
Medtr1g048060 5.0kb downstream 5.0kb downstream 6432 true chr1: 18188476-18194907 Medicago truncatula
Medtr1g048060 5.0kb downstream 5.0kb downstream 5000 false chr1: 18189908-18194907 Medicago truncatula
Medtr1g048060 10.0kb upstream 10.0kb upstream 11432 true chr1: 18178476-18189907 Medicago truncatula
Medtr1g048060 10.0kb upstream 10.0kb upstream 10000 false chr1: 18178476-18188475 Medicago truncatula
Medtr1g048060 10.0kb downstream 10.0kb downstream 11432 true chr1: 18188476-18199907 Medicago truncatula
Medtr1g048060 10.0kb downstream 10.0kb downstream 10000 false chr1: 18189908-18199907 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780321 5273 Angiosperm View MSA
122311440 5265 Fabidae View MSA
124072168 5270 Rosid View MSA
123745842 5271 Pentapetalae View MSA
122771668 5272 Eudicot View MSA
121051939 5274 Embryophyte View MSA
123092007 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.535       Low
cufflinks 0.943        
cufflinks 1.129        
cufflinks 3.776       High
cufflinks 1.312        
cufflinks 0.973        
cufflinks 1.219        
cufflinks 1.078        
cufflinks 1.858        

0 Strain