Gene : Medtr1g050340 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22847:SF502 - WD40 REPEAT PROTEIN MUCILAGE-MODIFIED 1 Description:  transcriptional corepressor leunig-like protein
Genomic Order:  2567 Name:  ? Medtr1g050340
Secondary Identifier:  ? PAC:31097706
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g050340 0.5kb upstream 0.5kb upstream 14497 true chr1: 19799845-19814341 Medicago truncatula
Medtr1g050340 0.5kb upstream 0.5kb upstream 500 false chr1: 19813842-19814341 Medicago truncatula
Medtr1g050340 0.5kb downstream 0.5kb downstream 14497 true chr1: 19799345-19813841 Medicago truncatula
Medtr1g050340 0.5kb downstream 0.5kb downstream 500 false chr1: 19799345-19799844 Medicago truncatula
Medtr1g050340 1.0kb upstream 1.0kb upstream 14997 true chr1: 19799845-19814841 Medicago truncatula
Medtr1g050340 1.0kb upstream 1.0kb upstream 1000 false chr1: 19813842-19814841 Medicago truncatula
Medtr1g050340 1.0kb downstream 1.0kb downstream 14997 true chr1: 19798845-19813841 Medicago truncatula
Medtr1g050340 1.0kb downstream 1.0kb downstream 1000 false chr1: 19798845-19799844 Medicago truncatula
Medtr1g050340 2.0kb upstream 2.0kb upstream 15997 true chr1: 19799845-19815841 Medicago truncatula
Medtr1g050340 2.0kb upstream 2.0kb upstream 2000 false chr1: 19813842-19815841 Medicago truncatula
Medtr1g050340 2.0kb downstream 2.0kb downstream 15997 true chr1: 19797845-19813841 Medicago truncatula
Medtr1g050340 2.0kb downstream 2.0kb downstream 2000 false chr1: 19797845-19799844 Medicago truncatula
Medtr1g050340 5.0kb upstream 5.0kb upstream 18997 true chr1: 19799845-19818841 Medicago truncatula
Medtr1g050340 5.0kb upstream 5.0kb upstream 5000 false chr1: 19813842-19818841 Medicago truncatula
Medtr1g050340 5.0kb downstream 5.0kb downstream 18997 true chr1: 19794845-19813841 Medicago truncatula
Medtr1g050340 5.0kb downstream 5.0kb downstream 5000 false chr1: 19794845-19799844 Medicago truncatula
Medtr1g050340 10.0kb upstream 10.0kb upstream 23997 true chr1: 19799845-19823841 Medicago truncatula
Medtr1g050340 10.0kb upstream 10.0kb upstream 10000 false chr1: 19813842-19823841 Medicago truncatula
Medtr1g050340 10.0kb downstream 10.0kb downstream 23997 true chr1: 19789845-19813841 Medicago truncatula
Medtr1g050340 10.0kb downstream 10.0kb downstream 10000 false chr1: 19789845-19799844 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299498 5265 Fabidae View MSA
124070895 5270 Rosid View MSA
123751820 5271 Pentapetalae View MSA
122789823 5272 Eudicot View MSA
122046787 5273 Angiosperm View MSA
123429146 5275 Viridiplantae View MSA
121350041 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.647       High
cufflinks 0.774        
cufflinks 1.27        
cufflinks 0.93        
cufflinks 1.37        
cufflinks 0.455       Low
cufflinks 1.626        
cufflinks 0.874        
cufflinks 1.506        

0 Strain