Gene : Medtr1g050505 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR12702//PTHR12702:SF4 - SEC15 Description:  exocyst complex component sec15B
Genomic Order:  2527 Name:  ? Medtr1g050505
Secondary Identifier:  ? PAC:31092881
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g050505 0.5kb upstream 0.5kb upstream 3855 true chr1: 19508265-19512119 Medicago truncatula
Medtr1g050505 0.5kb upstream 0.5kb upstream 500 false chr1: 19508265-19508764 Medicago truncatula
Medtr1g050505 0.5kb downstream 0.5kb downstream 3855 true chr1: 19508765-19512619 Medicago truncatula
Medtr1g050505 0.5kb downstream 0.5kb downstream 500 false chr1: 19512120-19512619 Medicago truncatula
Medtr1g050505 1.0kb upstream 1.0kb upstream 4355 true chr1: 19507765-19512119 Medicago truncatula
Medtr1g050505 1.0kb upstream 1.0kb upstream 1000 false chr1: 19507765-19508764 Medicago truncatula
Medtr1g050505 1.0kb downstream 1.0kb downstream 4355 true chr1: 19508765-19513119 Medicago truncatula
Medtr1g050505 1.0kb downstream 1.0kb downstream 1000 false chr1: 19512120-19513119 Medicago truncatula
Medtr1g050505 2.0kb upstream 2.0kb upstream 5355 true chr1: 19506765-19512119 Medicago truncatula
Medtr1g050505 2.0kb upstream 2.0kb upstream 2000 false chr1: 19506765-19508764 Medicago truncatula
Medtr1g050505 2.0kb downstream 2.0kb downstream 5355 true chr1: 19508765-19514119 Medicago truncatula
Medtr1g050505 2.0kb downstream 2.0kb downstream 2000 false chr1: 19512120-19514119 Medicago truncatula
Medtr1g050505 5.0kb upstream 5.0kb upstream 8355 true chr1: 19503765-19512119 Medicago truncatula
Medtr1g050505 5.0kb upstream 5.0kb upstream 5000 false chr1: 19503765-19508764 Medicago truncatula
Medtr1g050505 5.0kb downstream 5.0kb downstream 8355 true chr1: 19508765-19517119 Medicago truncatula
Medtr1g050505 5.0kb downstream 5.0kb downstream 5000 false chr1: 19512120-19517119 Medicago truncatula
Medtr1g050505 10.0kb upstream 10.0kb upstream 13355 true chr1: 19498765-19512119 Medicago truncatula
Medtr1g050505 10.0kb upstream 10.0kb upstream 10000 false chr1: 19498765-19508764 Medicago truncatula
Medtr1g050505 10.0kb downstream 10.0kb downstream 13355 true chr1: 19508765-19522119 Medicago truncatula
Medtr1g050505 10.0kb downstream 10.0kb downstream 10000 false chr1: 19512120-19522119 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311364 5265 Fabidae View MSA
124063470 5270 Rosid View MSA
123747184 5271 Pentapetalae View MSA
122789290 5272 Eudicot View MSA
122044095 5273 Angiosperm View MSA
121349214 5274 Embryophyte View MSA
123424246 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.646        
cufflinks 3.313        
cufflinks 3.924        
cufflinks 0.824       Low
cufflinks 5.723       High
cufflinks 0.478       Low
cufflinks 1.374        
cufflinks 3.431        
cufflinks 2.046        

0 Strain