Gene : Medtr1g050750 M. truncatula Mt4.0v1
Defline:  (1 of 10) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Description:  DNA-binding protein
Genomic Order:  2547 Name:  ? Medtr1g050750
Secondary Identifier:  ? PAC:31095634
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g050750 0.5kb upstream 0.5kb upstream 5426 true chr1: 19646399-19651824 Medicago truncatula
Medtr1g050750 0.5kb upstream 0.5kb upstream 500 false chr1: 19651325-19651824 Medicago truncatula
Medtr1g050750 0.5kb downstream 0.5kb downstream 5426 true chr1: 19645899-19651324 Medicago truncatula
Medtr1g050750 0.5kb downstream 0.5kb downstream 500 false chr1: 19645899-19646398 Medicago truncatula
Medtr1g050750 1.0kb upstream 1.0kb upstream 5926 true chr1: 19646399-19652324 Medicago truncatula
Medtr1g050750 1.0kb upstream 1.0kb upstream 1000 false chr1: 19651325-19652324 Medicago truncatula
Medtr1g050750 1.0kb downstream 1.0kb downstream 5926 true chr1: 19645399-19651324 Medicago truncatula
Medtr1g050750 1.0kb downstream 1.0kb downstream 1000 false chr1: 19645399-19646398 Medicago truncatula
Medtr1g050750 2.0kb upstream 2.0kb upstream 6926 true chr1: 19646399-19653324 Medicago truncatula
Medtr1g050750 2.0kb upstream 2.0kb upstream 2000 false chr1: 19651325-19653324 Medicago truncatula
Medtr1g050750 2.0kb downstream 2.0kb downstream 6926 true chr1: 19644399-19651324 Medicago truncatula
Medtr1g050750 2.0kb downstream 2.0kb downstream 2000 false chr1: 19644399-19646398 Medicago truncatula
Medtr1g050750 5.0kb upstream 5.0kb upstream 9926 true chr1: 19646399-19656324 Medicago truncatula
Medtr1g050750 5.0kb upstream 5.0kb upstream 5000 false chr1: 19651325-19656324 Medicago truncatula
Medtr1g050750 5.0kb downstream 5.0kb downstream 9926 true chr1: 19641399-19651324 Medicago truncatula
Medtr1g050750 5.0kb downstream 5.0kb downstream 5000 false chr1: 19641399-19646398 Medicago truncatula
Medtr1g050750 10.0kb upstream 10.0kb upstream 14926 true chr1: 19646399-19661324 Medicago truncatula
Medtr1g050750 10.0kb upstream 10.0kb upstream 10000 false chr1: 19651325-19661324 Medicago truncatula
Medtr1g050750 10.0kb downstream 10.0kb downstream 14926 true chr1: 19636399-19651324 Medicago truncatula
Medtr1g050750 10.0kb downstream 10.0kb downstream 10000 false chr1: 19636399-19646398 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311646 5265 Fabidae View MSA
124068490 5270 Rosid View MSA
123736856 5271 Pentapetalae View MSA
122790484 5272 Eudicot View MSA
122044724 5273 Angiosperm View MSA
121351065 5274 Embryophyte View MSA
123381996 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.545        
cufflinks 1.978        
cufflinks 2.002        
cufflinks 0.584       Low
cufflinks 8.088       High
cufflinks 0.521       Low
cufflinks 1.357        
cufflinks 3.225        
cufflinks 1.896        

0 Strain