Gene : Medtr1g054310 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG3291 - Ribosomal protein S7 Description:  40S ribosomal protein S5-2
Genomic Order:  2869 Name:  ? Medtr1g054310
Secondary Identifier:  ? PAC:31093675
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g054310 0.5kb upstream 0.5kb upstream 4021 true chr1: 23380614-23384634 Medicago truncatula
Medtr1g054310 0.5kb upstream 0.5kb upstream 500 false chr1: 23380614-23381113 Medicago truncatula
Medtr1g054310 0.5kb downstream 0.5kb downstream 4021 true chr1: 23381114-23385134 Medicago truncatula
Medtr1g054310 0.5kb downstream 0.5kb downstream 500 false chr1: 23384635-23385134 Medicago truncatula
Medtr1g054310 1.0kb upstream 1.0kb upstream 4521 true chr1: 23380114-23384634 Medicago truncatula
Medtr1g054310 1.0kb upstream 1.0kb upstream 1000 false chr1: 23380114-23381113 Medicago truncatula
Medtr1g054310 1.0kb downstream 1.0kb downstream 4521 true chr1: 23381114-23385634 Medicago truncatula
Medtr1g054310 1.0kb downstream 1.0kb downstream 1000 false chr1: 23384635-23385634 Medicago truncatula
Medtr1g054310 2.0kb upstream 2.0kb upstream 5521 true chr1: 23379114-23384634 Medicago truncatula
Medtr1g054310 2.0kb upstream 2.0kb upstream 2000 false chr1: 23379114-23381113 Medicago truncatula
Medtr1g054310 2.0kb downstream 2.0kb downstream 5521 true chr1: 23381114-23386634 Medicago truncatula
Medtr1g054310 2.0kb downstream 2.0kb downstream 2000 false chr1: 23384635-23386634 Medicago truncatula
Medtr1g054310 5.0kb upstream 5.0kb upstream 8521 true chr1: 23376114-23384634 Medicago truncatula
Medtr1g054310 5.0kb upstream 5.0kb upstream 5000 false chr1: 23376114-23381113 Medicago truncatula
Medtr1g054310 5.0kb downstream 5.0kb downstream 8521 true chr1: 23381114-23389634 Medicago truncatula
Medtr1g054310 5.0kb downstream 5.0kb downstream 5000 false chr1: 23384635-23389634 Medicago truncatula
Medtr1g054310 10.0kb upstream 10.0kb upstream 13521 true chr1: 23371114-23384634 Medicago truncatula
Medtr1g054310 10.0kb upstream 10.0kb upstream 10000 false chr1: 23371114-23381113 Medicago truncatula
Medtr1g054310 10.0kb downstream 10.0kb downstream 13521 true chr1: 23381114-23394634 Medicago truncatula
Medtr1g054310 10.0kb downstream 10.0kb downstream 10000 false chr1: 23384635-23394634 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311840 5265 Fabidae View MSA
124064641 5270 Rosid View MSA
123749742 5271 Pentapetalae View MSA
122785829 5272 Eudicot View MSA
122048966 5273 Angiosperm View MSA
121345669 5274 Embryophyte View MSA
123423957 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.291     High Low
cufflinks 32.394     High  
cufflinks 26.746     High  
cufflinks 66.404     High High
cufflinks 55.944     High High
cufflinks 24.635     High Low
cufflinks 34.896     High  
cufflinks 37.746     High  
cufflinks 54.434     High High

0 Strain