Gene : Medtr1g055035 M. truncatula Mt4.0v1
Defline:  (1 of 603) PF07127 - Late nodulin protein (Nodulin_late) Description:  Nodule Cysteine-Rich (NCR) secreted peptide
Genomic Order:  2950 Name:  ? Medtr1g055035
Secondary Identifier:  ? PAC:31094157
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g055035 0.5kb upstream 0.5kb upstream 1529 true chr1: 24215941-24217469 Medicago truncatula
Medtr1g055035 0.5kb upstream 0.5kb upstream 500 false chr1: 24215941-24216440 Medicago truncatula
Medtr1g055035 0.5kb downstream 0.5kb downstream 1529 true chr1: 24216441-24217969 Medicago truncatula
Medtr1g055035 0.5kb downstream 0.5kb downstream 500 false chr1: 24217470-24217969 Medicago truncatula
Medtr1g055035 1.0kb upstream 1.0kb upstream 2029 true chr1: 24215441-24217469 Medicago truncatula
Medtr1g055035 1.0kb upstream 1.0kb upstream 1000 false chr1: 24215441-24216440 Medicago truncatula
Medtr1g055035 1.0kb downstream 1.0kb downstream 2029 true chr1: 24216441-24218469 Medicago truncatula
Medtr1g055035 1.0kb downstream 1.0kb downstream 1000 false chr1: 24217470-24218469 Medicago truncatula
Medtr1g055035 2.0kb upstream 2.0kb upstream 3029 true chr1: 24214441-24217469 Medicago truncatula
Medtr1g055035 2.0kb upstream 2.0kb upstream 2000 false chr1: 24214441-24216440 Medicago truncatula
Medtr1g055035 2.0kb downstream 2.0kb downstream 3029 true chr1: 24216441-24219469 Medicago truncatula
Medtr1g055035 2.0kb downstream 2.0kb downstream 2000 false chr1: 24217470-24219469 Medicago truncatula
Medtr1g055035 5.0kb upstream 5.0kb upstream 6029 true chr1: 24211441-24217469 Medicago truncatula
Medtr1g055035 5.0kb upstream 5.0kb upstream 5000 false chr1: 24211441-24216440 Medicago truncatula
Medtr1g055035 5.0kb downstream 5.0kb downstream 6029 true chr1: 24216441-24222469 Medicago truncatula
Medtr1g055035 5.0kb downstream 5.0kb downstream 5000 false chr1: 24217470-24222469 Medicago truncatula
Medtr1g055035 10.0kb upstream 10.0kb upstream 11029 true chr1: 24206441-24217469 Medicago truncatula
Medtr1g055035 10.0kb upstream 10.0kb upstream 10000 false chr1: 24206441-24216440 Medicago truncatula
Medtr1g055035 10.0kb downstream 10.0kb downstream 11029 true chr1: 24216441-24227469 Medicago truncatula
Medtr1g055035 10.0kb downstream 10.0kb downstream 10000 false chr1: 24217470-24227469 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121618632 5273 Angiosperm Singleton cluster - no MSA
122255892 5265 Fabidae Singleton cluster - no MSA
123997549 5270 Rosid Singleton cluster - no MSA
123571861 5271 Pentapetalae Singleton cluster - no MSA
122606584 5272 Eudicot Singleton cluster - no MSA
120890736 5274 Embryophyte Singleton cluster - no MSA
122931391 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 45.503     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain