Gene : Medtr1g040690 M. truncatula Mt4.0v1
Defline:  (1 of 94) PF03140 - Plant protein of unknown function (DUF247) Description:  DUF247 domain protein
Genomic Order:  2425 Name:  ? Medtr1g040690
Secondary Identifier:  ? PAC:31095513
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g040690 0.5kb upstream 0.5kb upstream 3102 true chr1: 18519350-18522451 Medicago truncatula
Medtr1g040690 0.5kb upstream 0.5kb upstream 500 false chr1: 18519350-18519849 Medicago truncatula
Medtr1g040690 0.5kb downstream 0.5kb downstream 3102 true chr1: 18519850-18522951 Medicago truncatula
Medtr1g040690 0.5kb downstream 0.5kb downstream 500 false chr1: 18522452-18522951 Medicago truncatula
Medtr1g040690 1.0kb upstream 1.0kb upstream 3602 true chr1: 18518850-18522451 Medicago truncatula
Medtr1g040690 1.0kb upstream 1.0kb upstream 1000 false chr1: 18518850-18519849 Medicago truncatula
Medtr1g040690 1.0kb downstream 1.0kb downstream 3602 true chr1: 18519850-18523451 Medicago truncatula
Medtr1g040690 1.0kb downstream 1.0kb downstream 1000 false chr1: 18522452-18523451 Medicago truncatula
Medtr1g040690 2.0kb upstream 2.0kb upstream 4602 true chr1: 18517850-18522451 Medicago truncatula
Medtr1g040690 2.0kb upstream 2.0kb upstream 2000 false chr1: 18517850-18519849 Medicago truncatula
Medtr1g040690 2.0kb downstream 2.0kb downstream 4602 true chr1: 18519850-18524451 Medicago truncatula
Medtr1g040690 2.0kb downstream 2.0kb downstream 2000 false chr1: 18522452-18524451 Medicago truncatula
Medtr1g040690 5.0kb upstream 5.0kb upstream 7602 true chr1: 18514850-18522451 Medicago truncatula
Medtr1g040690 5.0kb upstream 5.0kb upstream 5000 false chr1: 18514850-18519849 Medicago truncatula
Medtr1g040690 5.0kb downstream 5.0kb downstream 7602 true chr1: 18519850-18527451 Medicago truncatula
Medtr1g040690 5.0kb downstream 5.0kb downstream 5000 false chr1: 18522452-18527451 Medicago truncatula
Medtr1g040690 10.0kb upstream 10.0kb upstream 12602 true chr1: 18509850-18522451 Medicago truncatula
Medtr1g040690 10.0kb upstream 10.0kb upstream 10000 false chr1: 18509850-18519849 Medicago truncatula
Medtr1g040690 10.0kb downstream 10.0kb downstream 12602 true chr1: 18519850-18532451 Medicago truncatula
Medtr1g040690 10.0kb downstream 10.0kb downstream 10000 false chr1: 18522452-18532451 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122316071 5265 Fabidae View MSA
124074599 5270 Rosid View MSA
123753721 5271 Pentapetalae View MSA
122797892 5272 Eudicot View MSA
122051031 5273 Angiosperm View MSA
121351531 5274 Embryophyte View MSA
123382209 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.027     Low Low
cufflinks 0.296        
cufflinks 0.316        
cufflinks 0.116        
cufflinks 0.306        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.061     Low  
cufflinks 0.374        
cufflinks 0.107        

0 Strain