Gene : Medtr1g040560 M. truncatula Mt4.0v1
Defline:  (1 of 2) 3.1.3.24 - Sucrose-phosphate phosphatase / Sucrose-6-phosphate phosphatase Description:  sucrose phosphate phosphatase
Genomic Order:  2432 Name:  ? Medtr1g040560
Secondary Identifier:  ? PAC:31097778
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7238 Medicago truncatula pathologic  
Mtruncatula SUCSYN-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g040560 0.5kb upstream 0.5kb upstream 6256 true chr1: 18583938-18590193 Medicago truncatula
Medtr1g040560 0.5kb upstream 0.5kb upstream 500 false chr1: 18589694-18590193 Medicago truncatula
Medtr1g040560 0.5kb downstream 0.5kb downstream 6256 true chr1: 18583438-18589693 Medicago truncatula
Medtr1g040560 0.5kb downstream 0.5kb downstream 500 false chr1: 18583438-18583937 Medicago truncatula
Medtr1g040560 1.0kb upstream 1.0kb upstream 6756 true chr1: 18583938-18590693 Medicago truncatula
Medtr1g040560 1.0kb upstream 1.0kb upstream 1000 false chr1: 18589694-18590693 Medicago truncatula
Medtr1g040560 1.0kb downstream 1.0kb downstream 6756 true chr1: 18582938-18589693 Medicago truncatula
Medtr1g040560 1.0kb downstream 1.0kb downstream 1000 false chr1: 18582938-18583937 Medicago truncatula
Medtr1g040560 2.0kb upstream 2.0kb upstream 7756 true chr1: 18583938-18591693 Medicago truncatula
Medtr1g040560 2.0kb upstream 2.0kb upstream 2000 false chr1: 18589694-18591693 Medicago truncatula
Medtr1g040560 2.0kb downstream 2.0kb downstream 7756 true chr1: 18581938-18589693 Medicago truncatula
Medtr1g040560 2.0kb downstream 2.0kb downstream 2000 false chr1: 18581938-18583937 Medicago truncatula
Medtr1g040560 5.0kb upstream 5.0kb upstream 10756 true chr1: 18583938-18594693 Medicago truncatula
Medtr1g040560 5.0kb upstream 5.0kb upstream 5000 false chr1: 18589694-18594693 Medicago truncatula
Medtr1g040560 5.0kb downstream 5.0kb downstream 10756 true chr1: 18578938-18589693 Medicago truncatula
Medtr1g040560 5.0kb downstream 5.0kb downstream 5000 false chr1: 18578938-18583937 Medicago truncatula
Medtr1g040560 10.0kb upstream 10.0kb upstream 15756 true chr1: 18583938-18599693 Medicago truncatula
Medtr1g040560 10.0kb upstream 10.0kb upstream 10000 false chr1: 18589694-18599693 Medicago truncatula
Medtr1g040560 10.0kb downstream 10.0kb downstream 15756 true chr1: 18573938-18589693 Medicago truncatula
Medtr1g040560 10.0kb downstream 10.0kb downstream 10000 false chr1: 18573938-18583937 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306348 5265 Fabidae View MSA
124037389 5270 Rosid View MSA
123748054 5271 Pentapetalae View MSA
122788536 5272 Eudicot View MSA
122041652 5273 Angiosperm View MSA
123428930 5275 Viridiplantae View MSA
121349182 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.698       High
cufflinks 0.424        
cufflinks 0.518        
cufflinks 0.084       Low
cufflinks 0.584        
cufflinks 0.071     Low Low
cufflinks 0.351        
cufflinks 0.423        
cufflinks 0.237        

0 Strain