Gene : Medtr1g040610 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  2428
Name:  ? Medtr1g040610 Secondary Identifier:  ? PAC:31097742
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g040610 0.5kb upstream 0.5kb upstream 10085 true chr1: 18554978-18565062 Medicago truncatula
Medtr1g040610 0.5kb upstream 0.5kb upstream 500 false chr1: 18554978-18555477 Medicago truncatula
Medtr1g040610 0.5kb downstream 0.5kb downstream 10085 true chr1: 18555478-18565562 Medicago truncatula
Medtr1g040610 0.5kb downstream 0.5kb downstream 500 false chr1: 18565063-18565562 Medicago truncatula
Medtr1g040610 1.0kb upstream 1.0kb upstream 10585 true chr1: 18554478-18565062 Medicago truncatula
Medtr1g040610 1.0kb upstream 1.0kb upstream 1000 false chr1: 18554478-18555477 Medicago truncatula
Medtr1g040610 1.0kb downstream 1.0kb downstream 10585 true chr1: 18555478-18566062 Medicago truncatula
Medtr1g040610 1.0kb downstream 1.0kb downstream 1000 false chr1: 18565063-18566062 Medicago truncatula
Medtr1g040610 2.0kb upstream 2.0kb upstream 11585 true chr1: 18553478-18565062 Medicago truncatula
Medtr1g040610 2.0kb upstream 2.0kb upstream 2000 false chr1: 18553478-18555477 Medicago truncatula
Medtr1g040610 2.0kb downstream 2.0kb downstream 11585 true chr1: 18555478-18567062 Medicago truncatula
Medtr1g040610 2.0kb downstream 2.0kb downstream 2000 false chr1: 18565063-18567062 Medicago truncatula
Medtr1g040610 5.0kb upstream 5.0kb upstream 14585 true chr1: 18550478-18565062 Medicago truncatula
Medtr1g040610 5.0kb upstream 5.0kb upstream 5000 false chr1: 18550478-18555477 Medicago truncatula
Medtr1g040610 5.0kb downstream 5.0kb downstream 14585 true chr1: 18555478-18570062 Medicago truncatula
Medtr1g040610 5.0kb downstream 5.0kb downstream 5000 false chr1: 18565063-18570062 Medicago truncatula
Medtr1g040610 10.0kb upstream 10.0kb upstream 19585 true chr1: 18545478-18565062 Medicago truncatula
Medtr1g040610 10.0kb upstream 10.0kb upstream 10000 false chr1: 18545478-18555477 Medicago truncatula
Medtr1g040610 10.0kb downstream 10.0kb downstream 19585 true chr1: 18555478-18575062 Medicago truncatula
Medtr1g040610 10.0kb downstream 10.0kb downstream 10000 false chr1: 18565063-18575062 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309159 5265 Fabidae View MSA
124068519 5270 Rosid View MSA
123739177 5271 Pentapetalae View MSA
122788918 5272 Eudicot View MSA
122044360 5273 Angiosperm View MSA
121349905 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.682       High
cufflinks 1.866        
cufflinks 2.103        
cufflinks 1.324        
cufflinks 2.426        
cufflinks 0.543       Low
cufflinks 1.826        
cufflinks 1.777        
cufflinks 1.755        

0 Strain