Gene : Medtr1g040435 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23042:SF65 - TRANSCRIPTION FACTOR BHLH92 Description:  basic helix loop helix protein, putative
Genomic Order:  1970 Name:  ? Medtr1g040435
Secondary Identifier:  ? PAC:31096918
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g040435 0.5kb upstream 0.5kb upstream 1911 true chr1: 14964847-14966757 Medicago truncatula
Medtr1g040435 0.5kb upstream 0.5kb upstream 500 false chr1: 14964847-14965346 Medicago truncatula
Medtr1g040435 0.5kb downstream 0.5kb downstream 1911 true chr1: 14965347-14967257 Medicago truncatula
Medtr1g040435 0.5kb downstream 0.5kb downstream 500 false chr1: 14966758-14967257 Medicago truncatula
Medtr1g040435 1.0kb upstream 1.0kb upstream 2411 true chr1: 14964347-14966757 Medicago truncatula
Medtr1g040435 1.0kb upstream 1.0kb upstream 1000 false chr1: 14964347-14965346 Medicago truncatula
Medtr1g040435 1.0kb downstream 1.0kb downstream 2411 true chr1: 14965347-14967757 Medicago truncatula
Medtr1g040435 1.0kb downstream 1.0kb downstream 1000 false chr1: 14966758-14967757 Medicago truncatula
Medtr1g040435 2.0kb upstream 2.0kb upstream 3411 true chr1: 14963347-14966757 Medicago truncatula
Medtr1g040435 2.0kb upstream 2.0kb upstream 2000 false chr1: 14963347-14965346 Medicago truncatula
Medtr1g040435 2.0kb downstream 2.0kb downstream 3411 true chr1: 14965347-14968757 Medicago truncatula
Medtr1g040435 2.0kb downstream 2.0kb downstream 2000 false chr1: 14966758-14968757 Medicago truncatula
Medtr1g040435 5.0kb upstream 5.0kb upstream 6411 true chr1: 14960347-14966757 Medicago truncatula
Medtr1g040435 5.0kb upstream 5.0kb upstream 5000 false chr1: 14960347-14965346 Medicago truncatula
Medtr1g040435 5.0kb downstream 5.0kb downstream 6411 true chr1: 14965347-14971757 Medicago truncatula
Medtr1g040435 5.0kb downstream 5.0kb downstream 5000 false chr1: 14966758-14971757 Medicago truncatula
Medtr1g040435 10.0kb upstream 10.0kb upstream 11411 true chr1: 14955347-14966757 Medicago truncatula
Medtr1g040435 10.0kb upstream 10.0kb upstream 10000 false chr1: 14955347-14965346 Medicago truncatula
Medtr1g040435 10.0kb downstream 10.0kb downstream 11411 true chr1: 14965347-14976757 Medicago truncatula
Medtr1g040435 10.0kb downstream 10.0kb downstream 10000 false chr1: 14966758-14976757 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309676 5265 Fabidae View MSA
124064245 5270 Rosid View MSA
123737328 5271 Pentapetalae View MSA
122793301 5272 Eudicot View MSA
122043534 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.889     High High
cufflinks 0.323       Low
cufflinks 4.567        
cufflinks 3.835        
cufflinks 0.539       Low
cufflinks 27.536     High High
cufflinks 10.007     High  
cufflinks 1.627        
cufflinks 4.83        

0 Strain