Gene : Medtr1g041345 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22891:SF45 - PROTEIN ARGONAUTE 10 Description:  eukaryotic translation initiation factor 2c
Genomic Order:  2031 Name:  ? Medtr1g041345
Secondary Identifier:  ? PAC:31093948
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g041345 0.5kb upstream 0.5kb upstream 9226 true chr1: 15404401-15413626 Medicago truncatula
Medtr1g041345 0.5kb upstream 0.5kb upstream 500 false chr1: 15404401-15404900 Medicago truncatula
Medtr1g041345 0.5kb downstream 0.5kb downstream 9226 true chr1: 15404901-15414126 Medicago truncatula
Medtr1g041345 0.5kb downstream 0.5kb downstream 500 false chr1: 15413627-15414126 Medicago truncatula
Medtr1g041345 1.0kb upstream 1.0kb upstream 9726 true chr1: 15403901-15413626 Medicago truncatula
Medtr1g041345 1.0kb upstream 1.0kb upstream 1000 false chr1: 15403901-15404900 Medicago truncatula
Medtr1g041345 1.0kb downstream 1.0kb downstream 9726 true chr1: 15404901-15414626 Medicago truncatula
Medtr1g041345 1.0kb downstream 1.0kb downstream 1000 false chr1: 15413627-15414626 Medicago truncatula
Medtr1g041345 2.0kb upstream 2.0kb upstream 10726 true chr1: 15402901-15413626 Medicago truncatula
Medtr1g041345 2.0kb upstream 2.0kb upstream 2000 false chr1: 15402901-15404900 Medicago truncatula
Medtr1g041345 2.0kb downstream 2.0kb downstream 10726 true chr1: 15404901-15415626 Medicago truncatula
Medtr1g041345 2.0kb downstream 2.0kb downstream 2000 false chr1: 15413627-15415626 Medicago truncatula
Medtr1g041345 5.0kb upstream 5.0kb upstream 13726 true chr1: 15399901-15413626 Medicago truncatula
Medtr1g041345 5.0kb upstream 5.0kb upstream 5000 false chr1: 15399901-15404900 Medicago truncatula
Medtr1g041345 5.0kb downstream 5.0kb downstream 13726 true chr1: 15404901-15418626 Medicago truncatula
Medtr1g041345 5.0kb downstream 5.0kb downstream 5000 false chr1: 15413627-15418626 Medicago truncatula
Medtr1g041345 10.0kb upstream 10.0kb upstream 18726 true chr1: 15394901-15413626 Medicago truncatula
Medtr1g041345 10.0kb upstream 10.0kb upstream 10000 false chr1: 15394901-15404900 Medicago truncatula
Medtr1g041345 10.0kb downstream 10.0kb downstream 18726 true chr1: 15404901-15423626 Medicago truncatula
Medtr1g041345 10.0kb downstream 10.0kb downstream 10000 false chr1: 15413627-15423626 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306623 5265 Fabidae View MSA
124061400 5270 Rosid View MSA
123738566 5271 Pentapetalae View MSA
122790150 5272 Eudicot View MSA
122045279 5273 Angiosperm View MSA
121345149 5274 Embryophyte View MSA
123428465 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.302        
cufflinks 3.343        
cufflinks 5.148       High
cufflinks 0.508        
cufflinks 4.975       High
cufflinks 0.136     Low Low
cufflinks 0.896        
cufflinks 4.421        
cufflinks 0.596        

0 Strain