Gene : Medtr1g042200 M. truncatula Mt4.0v1
Defline:  (1 of 603) PF07127 - Late nodulin protein (Nodulin_late) Description:  Nodule Cysteine-Rich (NCR) secreted peptide
Genomic Order:  2087 Name:  ? Medtr1g042200
Secondary Identifier:  ? PAC:31096744
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g042200 0.5kb upstream 0.5kb upstream 1433 true chr1: 15813194-15814626 Medicago truncatula
Medtr1g042200 0.5kb upstream 0.5kb upstream 500 false chr1: 15814127-15814626 Medicago truncatula
Medtr1g042200 0.5kb downstream 0.5kb downstream 1433 true chr1: 15812694-15814126 Medicago truncatula
Medtr1g042200 0.5kb downstream 0.5kb downstream 500 false chr1: 15812694-15813193 Medicago truncatula
Medtr1g042200 1.0kb upstream 1.0kb upstream 1933 true chr1: 15813194-15815126 Medicago truncatula
Medtr1g042200 1.0kb upstream 1.0kb upstream 1000 false chr1: 15814127-15815126 Medicago truncatula
Medtr1g042200 1.0kb downstream 1.0kb downstream 1933 true chr1: 15812194-15814126 Medicago truncatula
Medtr1g042200 1.0kb downstream 1.0kb downstream 1000 false chr1: 15812194-15813193 Medicago truncatula
Medtr1g042200 2.0kb upstream 2.0kb upstream 2933 true chr1: 15813194-15816126 Medicago truncatula
Medtr1g042200 2.0kb upstream 2.0kb upstream 2000 false chr1: 15814127-15816126 Medicago truncatula
Medtr1g042200 2.0kb downstream 2.0kb downstream 2933 true chr1: 15811194-15814126 Medicago truncatula
Medtr1g042200 2.0kb downstream 2.0kb downstream 2000 false chr1: 15811194-15813193 Medicago truncatula
Medtr1g042200 5.0kb upstream 5.0kb upstream 5933 true chr1: 15813194-15819126 Medicago truncatula
Medtr1g042200 5.0kb upstream 5.0kb upstream 5000 false chr1: 15814127-15819126 Medicago truncatula
Medtr1g042200 5.0kb downstream 5.0kb downstream 5933 true chr1: 15808194-15814126 Medicago truncatula
Medtr1g042200 5.0kb downstream 5.0kb downstream 5000 false chr1: 15808194-15813193 Medicago truncatula
Medtr1g042200 10.0kb upstream 10.0kb upstream 10933 true chr1: 15813194-15824126 Medicago truncatula
Medtr1g042200 10.0kb upstream 10.0kb upstream 10000 false chr1: 15814127-15824126 Medicago truncatula
Medtr1g042200 10.0kb downstream 10.0kb downstream 10933 true chr1: 15803194-15814126 Medicago truncatula
Medtr1g042200 10.0kb downstream 10.0kb downstream 10000 false chr1: 15803194-15813193 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121632795 5273 Angiosperm View MSA
122271565 5265 Fabidae View MSA
124012169 5270 Rosid View MSA
123586051 5271 Pentapetalae View MSA
122620748 5272 Eudicot View MSA
120904899 5274 Embryophyte View MSA
122945548 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.62     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain