Gene : Medtr1g052475 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR24073:SF578 - RAS-RELATED PROTEIN RABA4D Description:  RAB GTPase-like protein A1D
Genomic Order:  2708 Name:  ? Medtr1g052475
Secondary Identifier:  ? PAC:31098440
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g052475 0.5kb upstream 0.5kb upstream 3688 true chr1: 21335971-21339658 Medicago truncatula
Medtr1g052475 0.5kb upstream 0.5kb upstream 500 false chr1: 21335971-21336470 Medicago truncatula
Medtr1g052475 0.5kb downstream 0.5kb downstream 3688 true chr1: 21336471-21340158 Medicago truncatula
Medtr1g052475 0.5kb downstream 0.5kb downstream 500 false chr1: 21339659-21340158 Medicago truncatula
Medtr1g052475 1.0kb upstream 1.0kb upstream 4188 true chr1: 21335471-21339658 Medicago truncatula
Medtr1g052475 1.0kb upstream 1.0kb upstream 1000 false chr1: 21335471-21336470 Medicago truncatula
Medtr1g052475 1.0kb downstream 1.0kb downstream 4188 true chr1: 21336471-21340658 Medicago truncatula
Medtr1g052475 1.0kb downstream 1.0kb downstream 1000 false chr1: 21339659-21340658 Medicago truncatula
Medtr1g052475 2.0kb upstream 2.0kb upstream 5188 true chr1: 21334471-21339658 Medicago truncatula
Medtr1g052475 2.0kb upstream 2.0kb upstream 2000 false chr1: 21334471-21336470 Medicago truncatula
Medtr1g052475 2.0kb downstream 2.0kb downstream 5188 true chr1: 21336471-21341658 Medicago truncatula
Medtr1g052475 2.0kb downstream 2.0kb downstream 2000 false chr1: 21339659-21341658 Medicago truncatula
Medtr1g052475 5.0kb upstream 5.0kb upstream 8188 true chr1: 21331471-21339658 Medicago truncatula
Medtr1g052475 5.0kb upstream 5.0kb upstream 5000 false chr1: 21331471-21336470 Medicago truncatula
Medtr1g052475 5.0kb downstream 5.0kb downstream 8188 true chr1: 21336471-21344658 Medicago truncatula
Medtr1g052475 5.0kb downstream 5.0kb downstream 5000 false chr1: 21339659-21344658 Medicago truncatula
Medtr1g052475 10.0kb upstream 10.0kb upstream 13188 true chr1: 21326471-21339658 Medicago truncatula
Medtr1g052475 10.0kb upstream 10.0kb upstream 10000 false chr1: 21326471-21336470 Medicago truncatula
Medtr1g052475 10.0kb downstream 10.0kb downstream 13188 true chr1: 21336471-21349658 Medicago truncatula
Medtr1g052475 10.0kb downstream 10.0kb downstream 10000 false chr1: 21339659-21349658 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314261 5265 Fabidae View MSA
124065082 5270 Rosid View MSA
123746606 5271 Pentapetalae View MSA
122786113 5272 Eudicot View MSA
122041554 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.703     High High
cufflinks 2.567       Low
cufflinks 3.244        
cufflinks 6.814        
cufflinks 2.702       Low
cufflinks 6.948        
cufflinks 15.759     High High
cufflinks 3.058        
cufflinks 8.328        

0 Strain