Gene : Medtr1g041465 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31008:SF0 - COP1-INTERACTING PROTEIN-LIKE PROTEIN Description:  COP1-interacting-like protein
Genomic Order:  2047 Name:  ? Medtr1g041465
Secondary Identifier:  ? PAC:31097223
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g041465 0.5kb upstream 0.5kb upstream 8513 true chr1: 15555643-15564155 Medicago truncatula
Medtr1g041465 0.5kb upstream 0.5kb upstream 500 false chr1: 15555643-15556142 Medicago truncatula
Medtr1g041465 0.5kb downstream 0.5kb downstream 8513 true chr1: 15556143-15564655 Medicago truncatula
Medtr1g041465 0.5kb downstream 0.5kb downstream 500 false chr1: 15564156-15564655 Medicago truncatula
Medtr1g041465 1.0kb upstream 1.0kb upstream 9013 true chr1: 15555143-15564155 Medicago truncatula
Medtr1g041465 1.0kb upstream 1.0kb upstream 1000 false chr1: 15555143-15556142 Medicago truncatula
Medtr1g041465 1.0kb downstream 1.0kb downstream 9013 true chr1: 15556143-15565155 Medicago truncatula
Medtr1g041465 1.0kb downstream 1.0kb downstream 1000 false chr1: 15564156-15565155 Medicago truncatula
Medtr1g041465 2.0kb upstream 2.0kb upstream 10013 true chr1: 15554143-15564155 Medicago truncatula
Medtr1g041465 2.0kb upstream 2.0kb upstream 2000 false chr1: 15554143-15556142 Medicago truncatula
Medtr1g041465 2.0kb downstream 2.0kb downstream 10013 true chr1: 15556143-15566155 Medicago truncatula
Medtr1g041465 2.0kb downstream 2.0kb downstream 2000 false chr1: 15564156-15566155 Medicago truncatula
Medtr1g041465 5.0kb upstream 5.0kb upstream 13013 true chr1: 15551143-15564155 Medicago truncatula
Medtr1g041465 5.0kb upstream 5.0kb upstream 5000 false chr1: 15551143-15556142 Medicago truncatula
Medtr1g041465 5.0kb downstream 5.0kb downstream 13013 true chr1: 15556143-15569155 Medicago truncatula
Medtr1g041465 5.0kb downstream 5.0kb downstream 5000 false chr1: 15564156-15569155 Medicago truncatula
Medtr1g041465 10.0kb upstream 10.0kb upstream 18013 true chr1: 15546143-15564155 Medicago truncatula
Medtr1g041465 10.0kb upstream 10.0kb upstream 10000 false chr1: 15546143-15556142 Medicago truncatula
Medtr1g041465 10.0kb downstream 10.0kb downstream 18013 true chr1: 15556143-15574155 Medicago truncatula
Medtr1g041465 10.0kb downstream 10.0kb downstream 10000 false chr1: 15564156-15574155 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295466 5265 Fabidae View MSA
124035070 5270 Rosid View MSA
123744546 5271 Pentapetalae View MSA
122797843 5272 Eudicot View MSA
122048758 5273 Angiosperm View MSA
121350762 5274 Embryophyte View MSA
123381879 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.711        
cufflinks 0.563        
cufflinks 0.785        
cufflinks 0.133       Low
cufflinks 1.239       High
cufflinks 0.153       Low
cufflinks 0.539        
cufflinks 0.518        
cufflinks 0.614        

0 Strain