Gene : Medtr1g041445 M. truncatula Mt4.0v1
Defline:  (1 of 80) PF05938 - Plant self-incompatibility protein S1 (Self-incomp_S1) Description:  leguminosin group486 secreted peptide
Genomic Order:  2044 Name:  ? Medtr1g041445
Secondary Identifier:  ? PAC:31100794
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g041445 0.5kb upstream 0.5kb upstream 914 true chr1: 15538622-15539535 Medicago truncatula
Medtr1g041445 0.5kb upstream 0.5kb upstream 500 false chr1: 15538622-15539121 Medicago truncatula
Medtr1g041445 0.5kb downstream 0.5kb downstream 914 true chr1: 15539122-15540035 Medicago truncatula
Medtr1g041445 0.5kb downstream 0.5kb downstream 500 false chr1: 15539536-15540035 Medicago truncatula
Medtr1g041445 1.0kb upstream 1.0kb upstream 1414 true chr1: 15538122-15539535 Medicago truncatula
Medtr1g041445 1.0kb upstream 1.0kb upstream 1000 false chr1: 15538122-15539121 Medicago truncatula
Medtr1g041445 1.0kb downstream 1.0kb downstream 1414 true chr1: 15539122-15540535 Medicago truncatula
Medtr1g041445 1.0kb downstream 1.0kb downstream 1000 false chr1: 15539536-15540535 Medicago truncatula
Medtr1g041445 2.0kb upstream 2.0kb upstream 2414 true chr1: 15537122-15539535 Medicago truncatula
Medtr1g041445 2.0kb upstream 2.0kb upstream 2000 false chr1: 15537122-15539121 Medicago truncatula
Medtr1g041445 2.0kb downstream 2.0kb downstream 2414 true chr1: 15539122-15541535 Medicago truncatula
Medtr1g041445 2.0kb downstream 2.0kb downstream 2000 false chr1: 15539536-15541535 Medicago truncatula
Medtr1g041445 5.0kb upstream 5.0kb upstream 5414 true chr1: 15534122-15539535 Medicago truncatula
Medtr1g041445 5.0kb upstream 5.0kb upstream 5000 false chr1: 15534122-15539121 Medicago truncatula
Medtr1g041445 5.0kb downstream 5.0kb downstream 5414 true chr1: 15539122-15544535 Medicago truncatula
Medtr1g041445 5.0kb downstream 5.0kb downstream 5000 false chr1: 15539536-15544535 Medicago truncatula
Medtr1g041445 10.0kb upstream 10.0kb upstream 10414 true chr1: 15529122-15539535 Medicago truncatula
Medtr1g041445 10.0kb upstream 10.0kb upstream 10000 false chr1: 15529122-15539121 Medicago truncatula
Medtr1g041445 10.0kb downstream 10.0kb downstream 10414 true chr1: 15539122-15549535 Medicago truncatula
Medtr1g041445 10.0kb downstream 10.0kb downstream 10000 false chr1: 15539536-15549535 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122257396 5265 Fabidae Singleton cluster - no MSA
124039406 5270 Rosid View MSA
123752988 5271 Pentapetalae View MSA
122797955 5272 Eudicot View MSA
122045805 5273 Angiosperm View MSA
121350645 5274 Embryophyte View MSA
123381836 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain