Gene : Medtr1g043430 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23042:SF72 - TRANSCRIPTION FACTOR BHLH104-RELATED Description:  BHLH domain class transcription factor
Genomic Order:  2147 Name:  ? Medtr1g043430
Secondary Identifier:  ? PAC:31095724
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g043430 0.5kb upstream 0.5kb upstream 4680 true chr1: 16307613-16312292 Medicago truncatula
Medtr1g043430 0.5kb upstream 0.5kb upstream 500 false chr1: 16307613-16308112 Medicago truncatula
Medtr1g043430 0.5kb downstream 0.5kb downstream 4680 true chr1: 16308113-16312792 Medicago truncatula
Medtr1g043430 0.5kb downstream 0.5kb downstream 500 false chr1: 16312293-16312792 Medicago truncatula
Medtr1g043430 1.0kb upstream 1.0kb upstream 5180 true chr1: 16307113-16312292 Medicago truncatula
Medtr1g043430 1.0kb upstream 1.0kb upstream 1000 false chr1: 16307113-16308112 Medicago truncatula
Medtr1g043430 1.0kb downstream 1.0kb downstream 5180 true chr1: 16308113-16313292 Medicago truncatula
Medtr1g043430 1.0kb downstream 1.0kb downstream 1000 false chr1: 16312293-16313292 Medicago truncatula
Medtr1g043430 2.0kb upstream 2.0kb upstream 6180 true chr1: 16306113-16312292 Medicago truncatula
Medtr1g043430 2.0kb upstream 2.0kb upstream 2000 false chr1: 16306113-16308112 Medicago truncatula
Medtr1g043430 2.0kb downstream 2.0kb downstream 6180 true chr1: 16308113-16314292 Medicago truncatula
Medtr1g043430 2.0kb downstream 2.0kb downstream 2000 false chr1: 16312293-16314292 Medicago truncatula
Medtr1g043430 5.0kb upstream 5.0kb upstream 9180 true chr1: 16303113-16312292 Medicago truncatula
Medtr1g043430 5.0kb upstream 5.0kb upstream 5000 false chr1: 16303113-16308112 Medicago truncatula
Medtr1g043430 5.0kb downstream 5.0kb downstream 9180 true chr1: 16308113-16317292 Medicago truncatula
Medtr1g043430 5.0kb downstream 5.0kb downstream 5000 false chr1: 16312293-16317292 Medicago truncatula
Medtr1g043430 10.0kb upstream 10.0kb upstream 14180 true chr1: 16298113-16312292 Medicago truncatula
Medtr1g043430 10.0kb upstream 10.0kb upstream 10000 false chr1: 16298113-16308112 Medicago truncatula
Medtr1g043430 10.0kb downstream 10.0kb downstream 14180 true chr1: 16308113-16322292 Medicago truncatula
Medtr1g043430 10.0kb downstream 10.0kb downstream 10000 false chr1: 16312293-16322292 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301152 5265 Fabidae View MSA
124074840 5270 Rosid View MSA
123739971 5271 Pentapetalae View MSA
122794387 5272 Eudicot View MSA
122050434 5273 Angiosperm View MSA
121311906 5274 Embryophyte View MSA
123427389 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.786        
cufflinks 2.999        
cufflinks 2.699        
cufflinks 2.895        
cufflinks 3.178        
cufflinks 1.533       Low
cufflinks 3.282        
cufflinks 2.821        
cufflinks 3.332        

0 Strain