Gene : Medtr1g042940 M. truncatula Mt4.0v1
Defline:  (1 of 603) PF07127 - Late nodulin protein (Nodulin_late) Description:  Nodule Cysteine-Rich (NCR) secreted peptide
Genomic Order:  2125 Name:  ? Medtr1g042940
Secondary Identifier:  ? PAC:31092632
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g042940 0.5kb upstream 0.5kb upstream 1444 true chr1: 16083776-16085219 Medicago truncatula
Medtr1g042940 0.5kb upstream 0.5kb upstream 500 false chr1: 16084720-16085219 Medicago truncatula
Medtr1g042940 0.5kb downstream 0.5kb downstream 1444 true chr1: 16083276-16084719 Medicago truncatula
Medtr1g042940 0.5kb downstream 0.5kb downstream 500 false chr1: 16083276-16083775 Medicago truncatula
Medtr1g042940 1.0kb upstream 1.0kb upstream 1944 true chr1: 16083776-16085719 Medicago truncatula
Medtr1g042940 1.0kb upstream 1.0kb upstream 1000 false chr1: 16084720-16085719 Medicago truncatula
Medtr1g042940 1.0kb downstream 1.0kb downstream 1944 true chr1: 16082776-16084719 Medicago truncatula
Medtr1g042940 1.0kb downstream 1.0kb downstream 1000 false chr1: 16082776-16083775 Medicago truncatula
Medtr1g042940 2.0kb upstream 2.0kb upstream 2944 true chr1: 16083776-16086719 Medicago truncatula
Medtr1g042940 2.0kb upstream 2.0kb upstream 2000 false chr1: 16084720-16086719 Medicago truncatula
Medtr1g042940 2.0kb downstream 2.0kb downstream 2944 true chr1: 16081776-16084719 Medicago truncatula
Medtr1g042940 2.0kb downstream 2.0kb downstream 2000 false chr1: 16081776-16083775 Medicago truncatula
Medtr1g042940 5.0kb upstream 5.0kb upstream 5944 true chr1: 16083776-16089719 Medicago truncatula
Medtr1g042940 5.0kb upstream 5.0kb upstream 5000 false chr1: 16084720-16089719 Medicago truncatula
Medtr1g042940 5.0kb downstream 5.0kb downstream 5944 true chr1: 16078776-16084719 Medicago truncatula
Medtr1g042940 5.0kb downstream 5.0kb downstream 5000 false chr1: 16078776-16083775 Medicago truncatula
Medtr1g042940 10.0kb upstream 10.0kb upstream 10944 true chr1: 16083776-16094719 Medicago truncatula
Medtr1g042940 10.0kb upstream 10.0kb upstream 10000 false chr1: 16084720-16094719 Medicago truncatula
Medtr1g042940 10.0kb downstream 10.0kb downstream 10944 true chr1: 16073776-16084719 Medicago truncatula
Medtr1g042940 10.0kb downstream 10.0kb downstream 10000 false chr1: 16073776-16083775 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121632795 5273 Angiosperm View MSA
122271565 5265 Fabidae View MSA
124012169 5270 Rosid View MSA
123586051 5271 Pentapetalae View MSA
122620748 5272 Eudicot View MSA
120904899 5274 Embryophyte View MSA
122945548 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 177.897     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low  

0 Strain