Gene : Medtr1g042735 M. truncatula Mt4.0v1
Defline:  (1 of 48) PF02902 - Ulp1 protease family, C-terminal catalytic domain (Peptidase_C48) Description:  Ulp1 protease family, carboxy-terminal domain protein
Genomic Order:  2110 Name:  ? Medtr1g042735
Secondary Identifier:  ? PAC:31100411
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g042735 0.5kb upstream 0.5kb upstream 872 true chr1: 15991094-15991965 Medicago truncatula
Medtr1g042735 0.5kb upstream 0.5kb upstream 500 false chr1: 15991094-15991593 Medicago truncatula
Medtr1g042735 0.5kb downstream 0.5kb downstream 872 true chr1: 15991594-15992465 Medicago truncatula
Medtr1g042735 0.5kb downstream 0.5kb downstream 500 false chr1: 15991966-15992465 Medicago truncatula
Medtr1g042735 1.0kb upstream 1.0kb upstream 1372 true chr1: 15990594-15991965 Medicago truncatula
Medtr1g042735 1.0kb upstream 1.0kb upstream 1000 false chr1: 15990594-15991593 Medicago truncatula
Medtr1g042735 1.0kb downstream 1.0kb downstream 1372 true chr1: 15991594-15992965 Medicago truncatula
Medtr1g042735 1.0kb downstream 1.0kb downstream 1000 false chr1: 15991966-15992965 Medicago truncatula
Medtr1g042735 2.0kb upstream 2.0kb upstream 2372 true chr1: 15989594-15991965 Medicago truncatula
Medtr1g042735 2.0kb upstream 2.0kb upstream 2000 false chr1: 15989594-15991593 Medicago truncatula
Medtr1g042735 2.0kb downstream 2.0kb downstream 2372 true chr1: 15991594-15993965 Medicago truncatula
Medtr1g042735 2.0kb downstream 2.0kb downstream 2000 false chr1: 15991966-15993965 Medicago truncatula
Medtr1g042735 5.0kb upstream 5.0kb upstream 5372 true chr1: 15986594-15991965 Medicago truncatula
Medtr1g042735 5.0kb upstream 5.0kb upstream 5000 false chr1: 15986594-15991593 Medicago truncatula
Medtr1g042735 5.0kb downstream 5.0kb downstream 5372 true chr1: 15991594-15996965 Medicago truncatula
Medtr1g042735 5.0kb downstream 5.0kb downstream 5000 false chr1: 15991966-15996965 Medicago truncatula
Medtr1g042735 10.0kb upstream 10.0kb upstream 10372 true chr1: 15981594-15991965 Medicago truncatula
Medtr1g042735 10.0kb upstream 10.0kb upstream 10000 false chr1: 15981594-15991593 Medicago truncatula
Medtr1g042735 10.0kb downstream 10.0kb downstream 10372 true chr1: 15991594-16001965 Medicago truncatula
Medtr1g042735 10.0kb downstream 10.0kb downstream 10000 false chr1: 15991966-16001965 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121648906 5273 Angiosperm View MSA
122287985 5265 Fabidae View MSA
124028380 5270 Rosid View MSA
123602174 5271 Pentapetalae View MSA
122636862 5272 Eudicot View MSA
120921009 5274 Embryophyte View MSA
122961658 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.132       High
cufflinks 0.04     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.09        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.031     Low Low
cufflinks 0.0     Not Expressed Not Expressed

0 Strain