Gene : Medtr1g042850 M. truncatula Mt4.0v1
Defline:  (1 of 603) PF07127 - Late nodulin protein (Nodulin_late) Description:  Nodule Cysteine-Rich (NCR) secreted peptide
Genomic Order:  2120 Name:  ? Medtr1g042850
Secondary Identifier:  ? PAC:31099155
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g042850 0.5kb upstream 0.5kb upstream 1060 true chr1: 16029483-16030542 Medicago truncatula
Medtr1g042850 0.5kb upstream 0.5kb upstream 500 false chr1: 16030043-16030542 Medicago truncatula
Medtr1g042850 0.5kb downstream 0.5kb downstream 1060 true chr1: 16028983-16030042 Medicago truncatula
Medtr1g042850 0.5kb downstream 0.5kb downstream 500 false chr1: 16028983-16029482 Medicago truncatula
Medtr1g042850 1.0kb upstream 1.0kb upstream 1560 true chr1: 16029483-16031042 Medicago truncatula
Medtr1g042850 1.0kb upstream 1.0kb upstream 1000 false chr1: 16030043-16031042 Medicago truncatula
Medtr1g042850 1.0kb downstream 1.0kb downstream 1560 true chr1: 16028483-16030042 Medicago truncatula
Medtr1g042850 1.0kb downstream 1.0kb downstream 1000 false chr1: 16028483-16029482 Medicago truncatula
Medtr1g042850 2.0kb upstream 2.0kb upstream 2560 true chr1: 16029483-16032042 Medicago truncatula
Medtr1g042850 2.0kb upstream 2.0kb upstream 2000 false chr1: 16030043-16032042 Medicago truncatula
Medtr1g042850 2.0kb downstream 2.0kb downstream 2560 true chr1: 16027483-16030042 Medicago truncatula
Medtr1g042850 2.0kb downstream 2.0kb downstream 2000 false chr1: 16027483-16029482 Medicago truncatula
Medtr1g042850 5.0kb upstream 5.0kb upstream 5560 true chr1: 16029483-16035042 Medicago truncatula
Medtr1g042850 5.0kb upstream 5.0kb upstream 5000 false chr1: 16030043-16035042 Medicago truncatula
Medtr1g042850 5.0kb downstream 5.0kb downstream 5560 true chr1: 16024483-16030042 Medicago truncatula
Medtr1g042850 5.0kb downstream 5.0kb downstream 5000 false chr1: 16024483-16029482 Medicago truncatula
Medtr1g042850 10.0kb upstream 10.0kb upstream 10560 true chr1: 16029483-16040042 Medicago truncatula
Medtr1g042850 10.0kb upstream 10.0kb upstream 10000 false chr1: 16030043-16040042 Medicago truncatula
Medtr1g042850 10.0kb downstream 10.0kb downstream 10560 true chr1: 16019483-16030042 Medicago truncatula
Medtr1g042850 10.0kb downstream 10.0kb downstream 10000 false chr1: 16019483-16029482 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121632828 5273 Angiosperm View MSA
122271605 5265 Fabidae View MSA
124012204 5270 Rosid View MSA
123586085 5271 Pentapetalae View MSA
122620781 5272 Eudicot View MSA
120904932 5274 Embryophyte View MSA
122945581 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 124.73     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain