Gene : Medtr1g045060 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR16007//PTHR16007:SF30 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED Description:  transmembrane protein, putative
Genomic Order:  2217 Name:  ? Medtr1g045060
Secondary Identifier:  ? PAC:31094715
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g045060 0.5kb upstream 0.5kb upstream 1833 true chr1: 16975966-16977798 Medicago truncatula
Medtr1g045060 0.5kb upstream 0.5kb upstream 500 false chr1: 16975966-16976465 Medicago truncatula
Medtr1g045060 0.5kb downstream 0.5kb downstream 1833 true chr1: 16976466-16978298 Medicago truncatula
Medtr1g045060 0.5kb downstream 0.5kb downstream 500 false chr1: 16977799-16978298 Medicago truncatula
Medtr1g045060 1.0kb upstream 1.0kb upstream 2333 true chr1: 16975466-16977798 Medicago truncatula
Medtr1g045060 1.0kb upstream 1.0kb upstream 1000 false chr1: 16975466-16976465 Medicago truncatula
Medtr1g045060 1.0kb downstream 1.0kb downstream 2333 true chr1: 16976466-16978798 Medicago truncatula
Medtr1g045060 1.0kb downstream 1.0kb downstream 1000 false chr1: 16977799-16978798 Medicago truncatula
Medtr1g045060 2.0kb upstream 2.0kb upstream 3333 true chr1: 16974466-16977798 Medicago truncatula
Medtr1g045060 2.0kb upstream 2.0kb upstream 2000 false chr1: 16974466-16976465 Medicago truncatula
Medtr1g045060 2.0kb downstream 2.0kb downstream 3333 true chr1: 16976466-16979798 Medicago truncatula
Medtr1g045060 2.0kb downstream 2.0kb downstream 2000 false chr1: 16977799-16979798 Medicago truncatula
Medtr1g045060 5.0kb upstream 5.0kb upstream 6333 true chr1: 16971466-16977798 Medicago truncatula
Medtr1g045060 5.0kb upstream 5.0kb upstream 5000 false chr1: 16971466-16976465 Medicago truncatula
Medtr1g045060 5.0kb downstream 5.0kb downstream 6333 true chr1: 16976466-16982798 Medicago truncatula
Medtr1g045060 5.0kb downstream 5.0kb downstream 5000 false chr1: 16977799-16982798 Medicago truncatula
Medtr1g045060 10.0kb upstream 10.0kb upstream 11333 true chr1: 16966466-16977798 Medicago truncatula
Medtr1g045060 10.0kb upstream 10.0kb upstream 10000 false chr1: 16966466-16976465 Medicago truncatula
Medtr1g045060 10.0kb downstream 10.0kb downstream 11333 true chr1: 16976466-16987798 Medicago truncatula
Medtr1g045060 10.0kb downstream 10.0kb downstream 10000 false chr1: 16977799-16987798 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041247 5273 Angiosperm View MSA
122306472 5265 Fabidae View MSA
124071107 5270 Rosid View MSA
123742298 5271 Pentapetalae View MSA
122794517 5272 Eudicot View MSA
121344205 5274 Embryophyte View MSA
123380001 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.107        
cufflinks 1.083       Low
cufflinks 1.665        
cufflinks 24.297     High High
cufflinks 1.601        
cufflinks 36.178     High High
cufflinks 12.607     High  
cufflinks 0.948       Low
cufflinks 10.897     High  

0 Strain