Gene : Medtr1g044785 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31717:SF15 - CCT MOTIF-CONTAINING PROTEIN Description:  CCT motif protein
Genomic Order:  2207 Name:  ? Medtr1g044785
Secondary Identifier:  ? PAC:31098887
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g044785 0.5kb upstream 0.5kb upstream 2677 true chr1: 16920577-16923253 Medicago truncatula
Medtr1g044785 0.5kb upstream 0.5kb upstream 500 false chr1: 16920577-16921076 Medicago truncatula
Medtr1g044785 0.5kb downstream 0.5kb downstream 2677 true chr1: 16921077-16923753 Medicago truncatula
Medtr1g044785 0.5kb downstream 0.5kb downstream 500 false chr1: 16923254-16923753 Medicago truncatula
Medtr1g044785 1.0kb upstream 1.0kb upstream 3177 true chr1: 16920077-16923253 Medicago truncatula
Medtr1g044785 1.0kb upstream 1.0kb upstream 1000 false chr1: 16920077-16921076 Medicago truncatula
Medtr1g044785 1.0kb downstream 1.0kb downstream 3177 true chr1: 16921077-16924253 Medicago truncatula
Medtr1g044785 1.0kb downstream 1.0kb downstream 1000 false chr1: 16923254-16924253 Medicago truncatula
Medtr1g044785 2.0kb upstream 2.0kb upstream 4177 true chr1: 16919077-16923253 Medicago truncatula
Medtr1g044785 2.0kb upstream 2.0kb upstream 2000 false chr1: 16919077-16921076 Medicago truncatula
Medtr1g044785 2.0kb downstream 2.0kb downstream 4177 true chr1: 16921077-16925253 Medicago truncatula
Medtr1g044785 2.0kb downstream 2.0kb downstream 2000 false chr1: 16923254-16925253 Medicago truncatula
Medtr1g044785 5.0kb upstream 5.0kb upstream 7177 true chr1: 16916077-16923253 Medicago truncatula
Medtr1g044785 5.0kb upstream 5.0kb upstream 5000 false chr1: 16916077-16921076 Medicago truncatula
Medtr1g044785 5.0kb downstream 5.0kb downstream 7177 true chr1: 16921077-16928253 Medicago truncatula
Medtr1g044785 5.0kb downstream 5.0kb downstream 5000 false chr1: 16923254-16928253 Medicago truncatula
Medtr1g044785 10.0kb upstream 10.0kb upstream 12177 true chr1: 16911077-16923253 Medicago truncatula
Medtr1g044785 10.0kb upstream 10.0kb upstream 10000 false chr1: 16911077-16921076 Medicago truncatula
Medtr1g044785 10.0kb downstream 10.0kb downstream 12177 true chr1: 16921077-16933253 Medicago truncatula
Medtr1g044785 10.0kb downstream 10.0kb downstream 10000 false chr1: 16923254-16933253 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665707 5273 Angiosperm View MSA
122295512 5265 Fabidae View MSA
124051505 5270 Rosid View MSA
123620183 5271 Pentapetalae View MSA
122654599 5272 Eudicot View MSA
120937668 5274 Embryophyte View MSA
122978149 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.01     Low Low
cufflinks 0.391        
cufflinks 0.456        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.29        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.04     Low  
cufflinks 0.409        
cufflinks 0.017     Low Low

0 Strain