Gene : Medtr1g044155 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR31100:SF3 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 19-RELATED Description:  AT hook motif DNA-binding family protein
Genomic Order:  2175 Name:  ? Medtr1g044155
Secondary Identifier:  ? PAC:31093131
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g044155 0.5kb upstream 0.5kb upstream 3000 true chr1: 16576595-16579594 Medicago truncatula
Medtr1g044155 0.5kb upstream 0.5kb upstream 500 false chr1: 16576595-16577094 Medicago truncatula
Medtr1g044155 0.5kb downstream 0.5kb downstream 3000 true chr1: 16577095-16580094 Medicago truncatula
Medtr1g044155 0.5kb downstream 0.5kb downstream 500 false chr1: 16579595-16580094 Medicago truncatula
Medtr1g044155 1.0kb upstream 1.0kb upstream 3500 true chr1: 16576095-16579594 Medicago truncatula
Medtr1g044155 1.0kb upstream 1.0kb upstream 1000 false chr1: 16576095-16577094 Medicago truncatula
Medtr1g044155 1.0kb downstream 1.0kb downstream 3500 true chr1: 16577095-16580594 Medicago truncatula
Medtr1g044155 1.0kb downstream 1.0kb downstream 1000 false chr1: 16579595-16580594 Medicago truncatula
Medtr1g044155 2.0kb upstream 2.0kb upstream 4500 true chr1: 16575095-16579594 Medicago truncatula
Medtr1g044155 2.0kb upstream 2.0kb upstream 2000 false chr1: 16575095-16577094 Medicago truncatula
Medtr1g044155 2.0kb downstream 2.0kb downstream 4500 true chr1: 16577095-16581594 Medicago truncatula
Medtr1g044155 2.0kb downstream 2.0kb downstream 2000 false chr1: 16579595-16581594 Medicago truncatula
Medtr1g044155 5.0kb upstream 5.0kb upstream 7500 true chr1: 16572095-16579594 Medicago truncatula
Medtr1g044155 5.0kb upstream 5.0kb upstream 5000 false chr1: 16572095-16577094 Medicago truncatula
Medtr1g044155 5.0kb downstream 5.0kb downstream 7500 true chr1: 16577095-16584594 Medicago truncatula
Medtr1g044155 5.0kb downstream 5.0kb downstream 5000 false chr1: 16579595-16584594 Medicago truncatula
Medtr1g044155 10.0kb upstream 10.0kb upstream 12500 true chr1: 16567095-16579594 Medicago truncatula
Medtr1g044155 10.0kb upstream 10.0kb upstream 10000 false chr1: 16567095-16577094 Medicago truncatula
Medtr1g044155 10.0kb downstream 10.0kb downstream 12500 true chr1: 16577095-16589594 Medicago truncatula
Medtr1g044155 10.0kb downstream 10.0kb downstream 10000 false chr1: 16579595-16589594 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304888 5265 Fabidae View MSA
124071129 5270 Rosid View MSA
123751689 5271 Pentapetalae View MSA
122796160 5272 Eudicot View MSA
122048201 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.744     High  
cufflinks 0.09       Low
cufflinks 0.34        
cufflinks 32.187     High  
cufflinks 0.116       Low
cufflinks 38.073     High  
cufflinks 25.883     High  
cufflinks 0.222        
cufflinks 25.514     High  

0 Strain