Gene : Medtr1g044130 M. truncatula Mt4.0v1
Defline:  (1 of 14) PTHR21141 - 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER Description:  60S acidic ribosomal protein
Genomic Order:  2172 Name:  ? Medtr1g044130
Secondary Identifier:  ? PAC:31092473
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g044130 0.5kb upstream 0.5kb upstream 999 true chr1: 16532682-16533680 Medicago truncatula
Medtr1g044130 0.5kb upstream 0.5kb upstream 500 false chr1: 16532682-16533181 Medicago truncatula
Medtr1g044130 0.5kb downstream 0.5kb downstream 999 true chr1: 16533182-16534180 Medicago truncatula
Medtr1g044130 0.5kb downstream 0.5kb downstream 500 false chr1: 16533681-16534180 Medicago truncatula
Medtr1g044130 1.0kb upstream 1.0kb upstream 1499 true chr1: 16532182-16533680 Medicago truncatula
Medtr1g044130 1.0kb upstream 1.0kb upstream 1000 false chr1: 16532182-16533181 Medicago truncatula
Medtr1g044130 1.0kb downstream 1.0kb downstream 1499 true chr1: 16533182-16534680 Medicago truncatula
Medtr1g044130 1.0kb downstream 1.0kb downstream 1000 false chr1: 16533681-16534680 Medicago truncatula
Medtr1g044130 2.0kb upstream 2.0kb upstream 2499 true chr1: 16531182-16533680 Medicago truncatula
Medtr1g044130 2.0kb upstream 2.0kb upstream 2000 false chr1: 16531182-16533181 Medicago truncatula
Medtr1g044130 2.0kb downstream 2.0kb downstream 2499 true chr1: 16533182-16535680 Medicago truncatula
Medtr1g044130 2.0kb downstream 2.0kb downstream 2000 false chr1: 16533681-16535680 Medicago truncatula
Medtr1g044130 5.0kb upstream 5.0kb upstream 5499 true chr1: 16528182-16533680 Medicago truncatula
Medtr1g044130 5.0kb upstream 5.0kb upstream 5000 false chr1: 16528182-16533181 Medicago truncatula
Medtr1g044130 5.0kb downstream 5.0kb downstream 5499 true chr1: 16533182-16538680 Medicago truncatula
Medtr1g044130 5.0kb downstream 5.0kb downstream 5000 false chr1: 16533681-16538680 Medicago truncatula
Medtr1g044130 10.0kb upstream 10.0kb upstream 10499 true chr1: 16523182-16533680 Medicago truncatula
Medtr1g044130 10.0kb upstream 10.0kb upstream 10000 false chr1: 16523182-16533181 Medicago truncatula
Medtr1g044130 10.0kb downstream 10.0kb downstream 10499 true chr1: 16533182-16543680 Medicago truncatula
Medtr1g044130 10.0kb downstream 10.0kb downstream 10000 false chr1: 16533681-16543680 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121618298 5273 Angiosperm Singleton cluster - no MSA
122255524 5265 Fabidae Singleton cluster - no MSA
123997207 5270 Rosid Singleton cluster - no MSA
123571527 5271 Pentapetalae Singleton cluster - no MSA
122606250 5272 Eudicot Singleton cluster - no MSA
120890402 5274 Embryophyte Singleton cluster - no MSA
122931057 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.029     Low Low
cufflinks 0.159        
cufflinks 0.089        
cufflinks 2.236       High
cufflinks 0.408        
cufflinks 0.857        
cufflinks 0.28        
cufflinks 0.122        
cufflinks 0.507        

0 Strain