Gene : Medtr1g030010 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31580:SF2 - FILAMENT-LIKE PLANT PROTEIN 1-RELATED Description:  filament-like plant protein
Genomic Order:  1395 Name:  ? Medtr1g030010
Secondary Identifier:  ? PAC:31095057
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g030010 0.5kb upstream 0.5kb upstream 5489 true chr1: 10451242-10456730 Medicago truncatula
Medtr1g030010 0.5kb upstream 0.5kb upstream 500 false chr1: 10456231-10456730 Medicago truncatula
Medtr1g030010 0.5kb downstream 0.5kb downstream 5489 true chr1: 10450742-10456230 Medicago truncatula
Medtr1g030010 0.5kb downstream 0.5kb downstream 500 false chr1: 10450742-10451241 Medicago truncatula
Medtr1g030010 1.0kb upstream 1.0kb upstream 5989 true chr1: 10451242-10457230 Medicago truncatula
Medtr1g030010 1.0kb upstream 1.0kb upstream 1000 false chr1: 10456231-10457230 Medicago truncatula
Medtr1g030010 1.0kb downstream 1.0kb downstream 5989 true chr1: 10450242-10456230 Medicago truncatula
Medtr1g030010 1.0kb downstream 1.0kb downstream 1000 false chr1: 10450242-10451241 Medicago truncatula
Medtr1g030010 2.0kb upstream 2.0kb upstream 6989 true chr1: 10451242-10458230 Medicago truncatula
Medtr1g030010 2.0kb upstream 2.0kb upstream 2000 false chr1: 10456231-10458230 Medicago truncatula
Medtr1g030010 2.0kb downstream 2.0kb downstream 6989 true chr1: 10449242-10456230 Medicago truncatula
Medtr1g030010 2.0kb downstream 2.0kb downstream 2000 false chr1: 10449242-10451241 Medicago truncatula
Medtr1g030010 5.0kb upstream 5.0kb upstream 9989 true chr1: 10451242-10461230 Medicago truncatula
Medtr1g030010 5.0kb upstream 5.0kb upstream 5000 false chr1: 10456231-10461230 Medicago truncatula
Medtr1g030010 5.0kb downstream 5.0kb downstream 9989 true chr1: 10446242-10456230 Medicago truncatula
Medtr1g030010 5.0kb downstream 5.0kb downstream 5000 false chr1: 10446242-10451241 Medicago truncatula
Medtr1g030010 10.0kb upstream 10.0kb upstream 14989 true chr1: 10451242-10466230 Medicago truncatula
Medtr1g030010 10.0kb upstream 10.0kb upstream 10000 false chr1: 10456231-10466230 Medicago truncatula
Medtr1g030010 10.0kb downstream 10.0kb downstream 14989 true chr1: 10441242-10456230 Medicago truncatula
Medtr1g030010 10.0kb downstream 10.0kb downstream 10000 false chr1: 10441242-10451241 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313865 5265 Fabidae View MSA
124071762 5270 Rosid View MSA
123742978 5271 Pentapetalae View MSA
122791145 5272 Eudicot View MSA
122043487 5273 Angiosperm View MSA
121310135 5274 Embryophyte View MSA
123347707 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.391        
cufflinks 1.134        
cufflinks 1.577        
cufflinks 0.165       Low
cufflinks 1.867       High
cufflinks 0.24       Low
cufflinks 0.59        
cufflinks 1.583        
cufflinks 0.86        

0 Strain