Gene : Medtr1g029680 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR21669 - CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS Description:  wound-responsive family protein
Genomic Order:  1371 Name:  ? Medtr1g029680
Secondary Identifier:  ? PAC:31099199
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g029680 0.5kb upstream 0.5kb upstream 13986 true chr1: 10231947-10245932 Medicago truncatula
Medtr1g029680 0.5kb upstream 0.5kb upstream 500 false chr1: 10231947-10232446 Medicago truncatula
Medtr1g029680 0.5kb downstream 0.5kb downstream 13986 true chr1: 10232447-10246432 Medicago truncatula
Medtr1g029680 0.5kb downstream 0.5kb downstream 500 false chr1: 10245933-10246432 Medicago truncatula
Medtr1g029680 1.0kb upstream 1.0kb upstream 14486 true chr1: 10231447-10245932 Medicago truncatula
Medtr1g029680 1.0kb upstream 1.0kb upstream 1000 false chr1: 10231447-10232446 Medicago truncatula
Medtr1g029680 1.0kb downstream 1.0kb downstream 14486 true chr1: 10232447-10246932 Medicago truncatula
Medtr1g029680 1.0kb downstream 1.0kb downstream 1000 false chr1: 10245933-10246932 Medicago truncatula
Medtr1g029680 2.0kb upstream 2.0kb upstream 15486 true chr1: 10230447-10245932 Medicago truncatula
Medtr1g029680 2.0kb upstream 2.0kb upstream 2000 false chr1: 10230447-10232446 Medicago truncatula
Medtr1g029680 2.0kb downstream 2.0kb downstream 15486 true chr1: 10232447-10247932 Medicago truncatula
Medtr1g029680 2.0kb downstream 2.0kb downstream 2000 false chr1: 10245933-10247932 Medicago truncatula
Medtr1g029680 5.0kb upstream 5.0kb upstream 18486 true chr1: 10227447-10245932 Medicago truncatula
Medtr1g029680 5.0kb upstream 5.0kb upstream 5000 false chr1: 10227447-10232446 Medicago truncatula
Medtr1g029680 5.0kb downstream 5.0kb downstream 18486 true chr1: 10232447-10250932 Medicago truncatula
Medtr1g029680 5.0kb downstream 5.0kb downstream 5000 false chr1: 10245933-10250932 Medicago truncatula
Medtr1g029680 10.0kb upstream 10.0kb upstream 23486 true chr1: 10222447-10245932 Medicago truncatula
Medtr1g029680 10.0kb upstream 10.0kb upstream 10000 false chr1: 10222447-10232446 Medicago truncatula
Medtr1g029680 10.0kb downstream 10.0kb downstream 23486 true chr1: 10232447-10255932 Medicago truncatula
Medtr1g029680 10.0kb downstream 10.0kb downstream 10000 false chr1: 10245933-10255932 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314369 5265 Fabidae View MSA
124063112 5270 Rosid View MSA
123743839 5271 Pentapetalae View MSA
122787067 5272 Eudicot View MSA
122045408 5273 Angiosperm View MSA
121344687 5274 Embryophyte View MSA
123380086 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.47       High
cufflinks 0.196       Low
cufflinks 0.26        
cufflinks 0.238        
cufflinks 0.335        
cufflinks 0.292        
cufflinks 0.386        
cufflinks 0.16       Low
cufflinks 0.359        

0 Strain