Gene : Medtr1g031720 M. truncatula Mt4.0v1
Defline:  (1 of 599) PF13041 - PPR repeat family (PPR_2) Description:  PPR containing plant-like protein
Genomic Order:  1487 Name:  ? Medtr1g031720
Secondary Identifier:  ? PAC:31094151
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g031720 0.5kb upstream 0.5kb upstream 5834 true chr1: 11114706-11120539 Medicago truncatula
Medtr1g031720 0.5kb upstream 0.5kb upstream 500 false chr1: 11120040-11120539 Medicago truncatula
Medtr1g031720 0.5kb downstream 0.5kb downstream 5834 true chr1: 11114206-11120039 Medicago truncatula
Medtr1g031720 0.5kb downstream 0.5kb downstream 500 false chr1: 11114206-11114705 Medicago truncatula
Medtr1g031720 1.0kb upstream 1.0kb upstream 6334 true chr1: 11114706-11121039 Medicago truncatula
Medtr1g031720 1.0kb upstream 1.0kb upstream 1000 false chr1: 11120040-11121039 Medicago truncatula
Medtr1g031720 1.0kb downstream 1.0kb downstream 6334 true chr1: 11113706-11120039 Medicago truncatula
Medtr1g031720 1.0kb downstream 1.0kb downstream 1000 false chr1: 11113706-11114705 Medicago truncatula
Medtr1g031720 2.0kb upstream 2.0kb upstream 7334 true chr1: 11114706-11122039 Medicago truncatula
Medtr1g031720 2.0kb upstream 2.0kb upstream 2000 false chr1: 11120040-11122039 Medicago truncatula
Medtr1g031720 2.0kb downstream 2.0kb downstream 7334 true chr1: 11112706-11120039 Medicago truncatula
Medtr1g031720 2.0kb downstream 2.0kb downstream 2000 false chr1: 11112706-11114705 Medicago truncatula
Medtr1g031720 5.0kb upstream 5.0kb upstream 10334 true chr1: 11114706-11125039 Medicago truncatula
Medtr1g031720 5.0kb upstream 5.0kb upstream 5000 false chr1: 11120040-11125039 Medicago truncatula
Medtr1g031720 5.0kb downstream 5.0kb downstream 10334 true chr1: 11109706-11120039 Medicago truncatula
Medtr1g031720 5.0kb downstream 5.0kb downstream 5000 false chr1: 11109706-11114705 Medicago truncatula
Medtr1g031720 10.0kb upstream 10.0kb upstream 15334 true chr1: 11114706-11130039 Medicago truncatula
Medtr1g031720 10.0kb upstream 10.0kb upstream 10000 false chr1: 11120040-11130039 Medicago truncatula
Medtr1g031720 10.0kb downstream 10.0kb downstream 15334 true chr1: 11104706-11120039 Medicago truncatula
Medtr1g031720 10.0kb downstream 10.0kb downstream 10000 false chr1: 11104706-11114705 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313493 5265 Fabidae View MSA
124067532 5270 Rosid View MSA
123738721 5271 Pentapetalae View MSA
122787826 5272 Eudicot View MSA
122045787 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121310503 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.055        
cufflinks 3.237        
cufflinks 3.344        
cufflinks 0.497       Low
cufflinks 4.534       High
cufflinks 0.737       Low
cufflinks 1.234        
cufflinks 2.73        
cufflinks 1.091        

0 Strain