Gene : Medtr1g031790 M. truncatula Mt4.0v1
Defline:  (1 of 1) 4.1.2.53 - 2-keto-3-deoxy-L-rhamnonate aldolase / KDR aldolase Description:  2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase, putative
Genomic Order:  1492 Name:  ? Medtr1g031790
Secondary Identifier:  ? PAC:31095527
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g031790 0.5kb upstream 0.5kb upstream 2276 true chr1: 11150469-11152744 Medicago truncatula
Medtr1g031790 0.5kb upstream 0.5kb upstream 500 false chr1: 11152245-11152744 Medicago truncatula
Medtr1g031790 0.5kb downstream 0.5kb downstream 2276 true chr1: 11149969-11152244 Medicago truncatula
Medtr1g031790 0.5kb downstream 0.5kb downstream 500 false chr1: 11149969-11150468 Medicago truncatula
Medtr1g031790 1.0kb upstream 1.0kb upstream 2776 true chr1: 11150469-11153244 Medicago truncatula
Medtr1g031790 1.0kb upstream 1.0kb upstream 1000 false chr1: 11152245-11153244 Medicago truncatula
Medtr1g031790 1.0kb downstream 1.0kb downstream 2776 true chr1: 11149469-11152244 Medicago truncatula
Medtr1g031790 1.0kb downstream 1.0kb downstream 1000 false chr1: 11149469-11150468 Medicago truncatula
Medtr1g031790 2.0kb upstream 2.0kb upstream 3776 true chr1: 11150469-11154244 Medicago truncatula
Medtr1g031790 2.0kb upstream 2.0kb upstream 2000 false chr1: 11152245-11154244 Medicago truncatula
Medtr1g031790 2.0kb downstream 2.0kb downstream 3776 true chr1: 11148469-11152244 Medicago truncatula
Medtr1g031790 2.0kb downstream 2.0kb downstream 2000 false chr1: 11148469-11150468 Medicago truncatula
Medtr1g031790 5.0kb upstream 5.0kb upstream 6776 true chr1: 11150469-11157244 Medicago truncatula
Medtr1g031790 5.0kb upstream 5.0kb upstream 5000 false chr1: 11152245-11157244 Medicago truncatula
Medtr1g031790 5.0kb downstream 5.0kb downstream 6776 true chr1: 11145469-11152244 Medicago truncatula
Medtr1g031790 5.0kb downstream 5.0kb downstream 5000 false chr1: 11145469-11150468 Medicago truncatula
Medtr1g031790 10.0kb upstream 10.0kb upstream 11776 true chr1: 11150469-11162244 Medicago truncatula
Medtr1g031790 10.0kb upstream 10.0kb upstream 10000 false chr1: 11152245-11162244 Medicago truncatula
Medtr1g031790 10.0kb downstream 10.0kb downstream 11776 true chr1: 11140469-11152244 Medicago truncatula
Medtr1g031790 10.0kb downstream 10.0kb downstream 10000 false chr1: 11140469-11150468 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306785 5265 Fabidae View MSA
124061282 5270 Rosid View MSA
123741108 5271 Pentapetalae View MSA
122791173 5272 Eudicot View MSA
122045726 5273 Angiosperm View MSA
121345930 5274 Embryophyte View MSA
123426145 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.738       Low
cufflinks 2.53        
cufflinks 2.346        
cufflinks 5.488       High
cufflinks 3.834        
cufflinks 3.189        
cufflinks 1.905        
cufflinks 1.85        
cufflinks 6.189       High

0 Strain