Gene : Medtr1g032220 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR10209//PTHR10209:SF148 - OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN Description:  1-aminocyclopropane-1-carboxylate oxidase-like protein
Genomic Order:  1519 Name:  ? Medtr1g032220
Secondary Identifier:  ? PAC:31096357
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g032220 0.5kb upstream 0.5kb upstream 3477 true chr1: 11422414-11425890 Medicago truncatula
Medtr1g032220 0.5kb upstream 0.5kb upstream 500 false chr1: 11422414-11422913 Medicago truncatula
Medtr1g032220 0.5kb downstream 0.5kb downstream 3477 true chr1: 11422914-11426390 Medicago truncatula
Medtr1g032220 0.5kb downstream 0.5kb downstream 500 false chr1: 11425891-11426390 Medicago truncatula
Medtr1g032220 1.0kb upstream 1.0kb upstream 3977 true chr1: 11421914-11425890 Medicago truncatula
Medtr1g032220 1.0kb upstream 1.0kb upstream 1000 false chr1: 11421914-11422913 Medicago truncatula
Medtr1g032220 1.0kb downstream 1.0kb downstream 3977 true chr1: 11422914-11426890 Medicago truncatula
Medtr1g032220 1.0kb downstream 1.0kb downstream 1000 false chr1: 11425891-11426890 Medicago truncatula
Medtr1g032220 2.0kb upstream 2.0kb upstream 4977 true chr1: 11420914-11425890 Medicago truncatula
Medtr1g032220 2.0kb upstream 2.0kb upstream 2000 false chr1: 11420914-11422913 Medicago truncatula
Medtr1g032220 2.0kb downstream 2.0kb downstream 4977 true chr1: 11422914-11427890 Medicago truncatula
Medtr1g032220 2.0kb downstream 2.0kb downstream 2000 false chr1: 11425891-11427890 Medicago truncatula
Medtr1g032220 5.0kb upstream 5.0kb upstream 7977 true chr1: 11417914-11425890 Medicago truncatula
Medtr1g032220 5.0kb upstream 5.0kb upstream 5000 false chr1: 11417914-11422913 Medicago truncatula
Medtr1g032220 5.0kb downstream 5.0kb downstream 7977 true chr1: 11422914-11430890 Medicago truncatula
Medtr1g032220 5.0kb downstream 5.0kb downstream 5000 false chr1: 11425891-11430890 Medicago truncatula
Medtr1g032220 10.0kb upstream 10.0kb upstream 12977 true chr1: 11412914-11425890 Medicago truncatula
Medtr1g032220 10.0kb upstream 10.0kb upstream 10000 false chr1: 11412914-11422913 Medicago truncatula
Medtr1g032220 10.0kb downstream 10.0kb downstream 12977 true chr1: 11422914-11435890 Medicago truncatula
Medtr1g032220 10.0kb downstream 10.0kb downstream 10000 false chr1: 11425891-11435890 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301513 5265 Fabidae View MSA
124071640 5270 Rosid View MSA
123753505 5271 Pentapetalae View MSA
122796711 5272 Eudicot View MSA
122051611 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121351374 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.276     High  
cufflinks 54.73     High High
cufflinks 28.525     High  
cufflinks 23.133     High  
cufflinks 29.268     High  
cufflinks 7.254       Low
cufflinks 19.229     High  
cufflinks 38.819     High  
cufflinks 15.331     High  

0 Strain