Gene : Medtr1g032110 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR16023 - TAX1 BINDING PROTEIN-RELATED Description:  VAC14-like protein
Genomic Order:  1512 Name:  ? Medtr1g032110
Secondary Identifier:  ? PAC:31097619
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g032110 0.5kb upstream 0.5kb upstream 9479 true chr1: 11362455-11371933 Medicago truncatula
Medtr1g032110 0.5kb upstream 0.5kb upstream 500 false chr1: 11371434-11371933 Medicago truncatula
Medtr1g032110 0.5kb downstream 0.5kb downstream 9479 true chr1: 11361955-11371433 Medicago truncatula
Medtr1g032110 0.5kb downstream 0.5kb downstream 500 false chr1: 11361955-11362454 Medicago truncatula
Medtr1g032110 1.0kb upstream 1.0kb upstream 9979 true chr1: 11362455-11372433 Medicago truncatula
Medtr1g032110 1.0kb upstream 1.0kb upstream 1000 false chr1: 11371434-11372433 Medicago truncatula
Medtr1g032110 1.0kb downstream 1.0kb downstream 9979 true chr1: 11361455-11371433 Medicago truncatula
Medtr1g032110 1.0kb downstream 1.0kb downstream 1000 false chr1: 11361455-11362454 Medicago truncatula
Medtr1g032110 2.0kb upstream 2.0kb upstream 10979 true chr1: 11362455-11373433 Medicago truncatula
Medtr1g032110 2.0kb upstream 2.0kb upstream 2000 false chr1: 11371434-11373433 Medicago truncatula
Medtr1g032110 2.0kb downstream 2.0kb downstream 10979 true chr1: 11360455-11371433 Medicago truncatula
Medtr1g032110 2.0kb downstream 2.0kb downstream 2000 false chr1: 11360455-11362454 Medicago truncatula
Medtr1g032110 5.0kb upstream 5.0kb upstream 13979 true chr1: 11362455-11376433 Medicago truncatula
Medtr1g032110 5.0kb upstream 5.0kb upstream 5000 false chr1: 11371434-11376433 Medicago truncatula
Medtr1g032110 5.0kb downstream 5.0kb downstream 13979 true chr1: 11357455-11371433 Medicago truncatula
Medtr1g032110 5.0kb downstream 5.0kb downstream 5000 false chr1: 11357455-11362454 Medicago truncatula
Medtr1g032110 10.0kb upstream 10.0kb upstream 18979 true chr1: 11362455-11381433 Medicago truncatula
Medtr1g032110 10.0kb upstream 10.0kb upstream 10000 false chr1: 11371434-11381433 Medicago truncatula
Medtr1g032110 10.0kb downstream 10.0kb downstream 18979 true chr1: 11352455-11371433 Medicago truncatula
Medtr1g032110 10.0kb downstream 10.0kb downstream 10000 false chr1: 11352455-11362454 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311338 5265 Fabidae View MSA
124065694 5270 Rosid View MSA
123742158 5271 Pentapetalae View MSA
122787400 5272 Eudicot View MSA
122047421 5273 Angiosperm View MSA
121346915 5274 Embryophyte View MSA
123428205 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.019       High
cufflinks 3.493        
cufflinks 3.414        
cufflinks 2.193       Low
cufflinks 3.837        
cufflinks 1.981       Low
cufflinks 4.772       High
cufflinks 2.772        
cufflinks 3.082        

0 Strain