Gene : Medtr1g033230 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR13989 - REPLICATION PROTEIN A-RELATED Description:  OB-fold nucleic acid-binding domain protein
Genomic Order:  1589 Name:  ? Medtr1g033230
Secondary Identifier:  ? PAC:31096632
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g033230 0.5kb upstream 0.5kb upstream 1333 true chr1: 11933493-11934825 Medicago truncatula
Medtr1g033230 0.5kb upstream 0.5kb upstream 500 false chr1: 11933493-11933992 Medicago truncatula
Medtr1g033230 0.5kb downstream 0.5kb downstream 1333 true chr1: 11933993-11935325 Medicago truncatula
Medtr1g033230 0.5kb downstream 0.5kb downstream 500 false chr1: 11934826-11935325 Medicago truncatula
Medtr1g033230 1.0kb upstream 1.0kb upstream 1833 true chr1: 11932993-11934825 Medicago truncatula
Medtr1g033230 1.0kb upstream 1.0kb upstream 1000 false chr1: 11932993-11933992 Medicago truncatula
Medtr1g033230 1.0kb downstream 1.0kb downstream 1833 true chr1: 11933993-11935825 Medicago truncatula
Medtr1g033230 1.0kb downstream 1.0kb downstream 1000 false chr1: 11934826-11935825 Medicago truncatula
Medtr1g033230 2.0kb upstream 2.0kb upstream 2833 true chr1: 11931993-11934825 Medicago truncatula
Medtr1g033230 2.0kb upstream 2.0kb upstream 2000 false chr1: 11931993-11933992 Medicago truncatula
Medtr1g033230 2.0kb downstream 2.0kb downstream 2833 true chr1: 11933993-11936825 Medicago truncatula
Medtr1g033230 2.0kb downstream 2.0kb downstream 2000 false chr1: 11934826-11936825 Medicago truncatula
Medtr1g033230 5.0kb upstream 5.0kb upstream 5833 true chr1: 11928993-11934825 Medicago truncatula
Medtr1g033230 5.0kb upstream 5.0kb upstream 5000 false chr1: 11928993-11933992 Medicago truncatula
Medtr1g033230 5.0kb downstream 5.0kb downstream 5833 true chr1: 11933993-11939825 Medicago truncatula
Medtr1g033230 5.0kb downstream 5.0kb downstream 5000 false chr1: 11934826-11939825 Medicago truncatula
Medtr1g033230 10.0kb upstream 10.0kb upstream 10833 true chr1: 11923993-11934825 Medicago truncatula
Medtr1g033230 10.0kb upstream 10.0kb upstream 10000 false chr1: 11923993-11933992 Medicago truncatula
Medtr1g033230 10.0kb downstream 10.0kb downstream 10833 true chr1: 11933993-11944825 Medicago truncatula
Medtr1g033230 10.0kb downstream 10.0kb downstream 10000 false chr1: 11934826-11944825 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312483 5265 Fabidae View MSA
124067741 5270 Rosid View MSA
123737175 5271 Pentapetalae View MSA
122786413 5272 Eudicot View MSA
122044102 5273 Angiosperm View MSA
121345132 5274 Embryophyte View MSA
123425190 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.515       Low
cufflinks 1.009        
cufflinks 1.079        
cufflinks 1.881       High
cufflinks 2.219       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.536       Low
cufflinks 1.087        
cufflinks 0.723        

0 Strain