Gene : Medtr1g033480 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11922//PTHR11922:SF37 - GMP SYNTHASE-RELATED Description:  anthranilate synthase component II
Genomic Order:  1604 Name:  ? Medtr1g033480
Secondary Identifier:  ? PAC:31098750
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula TRPSYN-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g033480 0.5kb upstream 0.5kb upstream 4894 true chr1: 12076381-12081274 Medicago truncatula
Medtr1g033480 0.5kb upstream 0.5kb upstream 500 false chr1: 12080775-12081274 Medicago truncatula
Medtr1g033480 0.5kb downstream 0.5kb downstream 4894 true chr1: 12075881-12080774 Medicago truncatula
Medtr1g033480 0.5kb downstream 0.5kb downstream 500 false chr1: 12075881-12076380 Medicago truncatula
Medtr1g033480 1.0kb upstream 1.0kb upstream 5394 true chr1: 12076381-12081774 Medicago truncatula
Medtr1g033480 1.0kb upstream 1.0kb upstream 1000 false chr1: 12080775-12081774 Medicago truncatula
Medtr1g033480 1.0kb downstream 1.0kb downstream 5394 true chr1: 12075381-12080774 Medicago truncatula
Medtr1g033480 1.0kb downstream 1.0kb downstream 1000 false chr1: 12075381-12076380 Medicago truncatula
Medtr1g033480 2.0kb upstream 2.0kb upstream 6394 true chr1: 12076381-12082774 Medicago truncatula
Medtr1g033480 2.0kb upstream 2.0kb upstream 2000 false chr1: 12080775-12082774 Medicago truncatula
Medtr1g033480 2.0kb downstream 2.0kb downstream 6394 true chr1: 12074381-12080774 Medicago truncatula
Medtr1g033480 2.0kb downstream 2.0kb downstream 2000 false chr1: 12074381-12076380 Medicago truncatula
Medtr1g033480 5.0kb upstream 5.0kb upstream 9394 true chr1: 12076381-12085774 Medicago truncatula
Medtr1g033480 5.0kb upstream 5.0kb upstream 5000 false chr1: 12080775-12085774 Medicago truncatula
Medtr1g033480 5.0kb downstream 5.0kb downstream 9394 true chr1: 12071381-12080774 Medicago truncatula
Medtr1g033480 5.0kb downstream 5.0kb downstream 5000 false chr1: 12071381-12076380 Medicago truncatula
Medtr1g033480 10.0kb upstream 10.0kb upstream 14394 true chr1: 12076381-12090774 Medicago truncatula
Medtr1g033480 10.0kb upstream 10.0kb upstream 10000 false chr1: 12080775-12090774 Medicago truncatula
Medtr1g033480 10.0kb downstream 10.0kb downstream 14394 true chr1: 12066381-12080774 Medicago truncatula
Medtr1g033480 10.0kb downstream 10.0kb downstream 10000 false chr1: 12066381-12076380 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301638 5265 Fabidae View MSA
124061259 5270 Rosid View MSA
123743994 5271 Pentapetalae View MSA
122794235 5272 Eudicot View MSA
122041811 5273 Angiosperm View MSA
121344905 5274 Embryophyte View MSA
123424838 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.731       Low
cufflinks 3.511        
cufflinks 4.306        
cufflinks 3.269        
cufflinks 4.782       High
cufflinks 1.155       Low
cufflinks 2.99        
cufflinks 3.361        
cufflinks 3.742        

0 Strain