Gene : Medtr1g033080 M. truncatula Mt4.0v1
Defline:  (1 of 3) PF01190//PF04554 - Pollen proteins Ole e I like (Pollen_Ole_e_I) // Extensin-like region (Extensin_2) Description:  pollen Ole e I family allergens
Genomic Order:  1579 Name:  ? Medtr1g033080
Secondary Identifier:  ? PAC:31098456
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g033080 0.5kb upstream 0.5kb upstream 5473 true chr1: 11878422-11883894 Medicago truncatula
Medtr1g033080 0.5kb upstream 0.5kb upstream 500 false chr1: 11878422-11878921 Medicago truncatula
Medtr1g033080 0.5kb downstream 0.5kb downstream 5473 true chr1: 11878922-11884394 Medicago truncatula
Medtr1g033080 0.5kb downstream 0.5kb downstream 500 false chr1: 11883895-11884394 Medicago truncatula
Medtr1g033080 1.0kb upstream 1.0kb upstream 5973 true chr1: 11877922-11883894 Medicago truncatula
Medtr1g033080 1.0kb upstream 1.0kb upstream 1000 false chr1: 11877922-11878921 Medicago truncatula
Medtr1g033080 1.0kb downstream 1.0kb downstream 5973 true chr1: 11878922-11884894 Medicago truncatula
Medtr1g033080 1.0kb downstream 1.0kb downstream 1000 false chr1: 11883895-11884894 Medicago truncatula
Medtr1g033080 2.0kb upstream 2.0kb upstream 6973 true chr1: 11876922-11883894 Medicago truncatula
Medtr1g033080 2.0kb upstream 2.0kb upstream 2000 false chr1: 11876922-11878921 Medicago truncatula
Medtr1g033080 2.0kb downstream 2.0kb downstream 6973 true chr1: 11878922-11885894 Medicago truncatula
Medtr1g033080 2.0kb downstream 2.0kb downstream 2000 false chr1: 11883895-11885894 Medicago truncatula
Medtr1g033080 5.0kb upstream 5.0kb upstream 9973 true chr1: 11873922-11883894 Medicago truncatula
Medtr1g033080 5.0kb upstream 5.0kb upstream 5000 false chr1: 11873922-11878921 Medicago truncatula
Medtr1g033080 5.0kb downstream 5.0kb downstream 9973 true chr1: 11878922-11888894 Medicago truncatula
Medtr1g033080 5.0kb downstream 5.0kb downstream 5000 false chr1: 11883895-11888894 Medicago truncatula
Medtr1g033080 10.0kb upstream 10.0kb upstream 14973 true chr1: 11868922-11883894 Medicago truncatula
Medtr1g033080 10.0kb upstream 10.0kb upstream 10000 false chr1: 11868922-11878921 Medicago truncatula
Medtr1g033080 10.0kb downstream 10.0kb downstream 14973 true chr1: 11878922-11893894 Medicago truncatula
Medtr1g033080 10.0kb downstream 10.0kb downstream 10000 false chr1: 11883895-11893894 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297423 5265 Fabidae View MSA
124072659 5270 Rosid View MSA
123753028 5271 Pentapetalae View MSA
122796591 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 66.246     High  
cufflinks 33.857     High  
cufflinks 23.088     High Low
cufflinks 322.081     High High
cufflinks 41.599     High  
cufflinks 203.438     High  
cufflinks 289.611     High  
cufflinks 26.958     High Low
cufflinks 445.266     High High

0 Strain