Gene : Medtr1g033130 M. truncatula Mt4.0v1
Defline:  (1 of 3) PF01190//PF04554 - Pollen proteins Ole e I like (Pollen_Ole_e_I) // Extensin-like region (Extensin_2) Description:  pollen protein Ole E I-like protein
Genomic Order:  1583 Name:  ? Medtr1g033130
Secondary Identifier:  ? PAC:31097919
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g033130 0.5kb upstream 0.5kb upstream 5135 true chr1: 11901177-11906311 Medicago truncatula
Medtr1g033130 0.5kb upstream 0.5kb upstream 500 false chr1: 11901177-11901676 Medicago truncatula
Medtr1g033130 0.5kb downstream 0.5kb downstream 5135 true chr1: 11901677-11906811 Medicago truncatula
Medtr1g033130 0.5kb downstream 0.5kb downstream 500 false chr1: 11906312-11906811 Medicago truncatula
Medtr1g033130 1.0kb upstream 1.0kb upstream 5635 true chr1: 11900677-11906311 Medicago truncatula
Medtr1g033130 1.0kb upstream 1.0kb upstream 1000 false chr1: 11900677-11901676 Medicago truncatula
Medtr1g033130 1.0kb downstream 1.0kb downstream 5635 true chr1: 11901677-11907311 Medicago truncatula
Medtr1g033130 1.0kb downstream 1.0kb downstream 1000 false chr1: 11906312-11907311 Medicago truncatula
Medtr1g033130 2.0kb upstream 2.0kb upstream 6635 true chr1: 11899677-11906311 Medicago truncatula
Medtr1g033130 2.0kb upstream 2.0kb upstream 2000 false chr1: 11899677-11901676 Medicago truncatula
Medtr1g033130 2.0kb downstream 2.0kb downstream 6635 true chr1: 11901677-11908311 Medicago truncatula
Medtr1g033130 2.0kb downstream 2.0kb downstream 2000 false chr1: 11906312-11908311 Medicago truncatula
Medtr1g033130 5.0kb upstream 5.0kb upstream 9635 true chr1: 11896677-11906311 Medicago truncatula
Medtr1g033130 5.0kb upstream 5.0kb upstream 5000 false chr1: 11896677-11901676 Medicago truncatula
Medtr1g033130 5.0kb downstream 5.0kb downstream 9635 true chr1: 11901677-11911311 Medicago truncatula
Medtr1g033130 5.0kb downstream 5.0kb downstream 5000 false chr1: 11906312-11911311 Medicago truncatula
Medtr1g033130 10.0kb upstream 10.0kb upstream 14635 true chr1: 11891677-11906311 Medicago truncatula
Medtr1g033130 10.0kb upstream 10.0kb upstream 10000 false chr1: 11891677-11901676 Medicago truncatula
Medtr1g033130 10.0kb downstream 10.0kb downstream 14635 true chr1: 11901677-11916311 Medicago truncatula
Medtr1g033130 10.0kb downstream 10.0kb downstream 10000 false chr1: 11906312-11916311 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297423 5265 Fabidae View MSA
124072659 5270 Rosid View MSA
123753028 5271 Pentapetalae View MSA
122796591 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.774        
cufflinks 1.64        
cufflinks 1.204       Low
cufflinks 30.155     High  
cufflinks 1.963        
cufflinks 20.078     High  
cufflinks 32.896     High  
cufflinks 1.273       Low
cufflinks 61.378     High High

0 Strain