Gene : Medtr1g034240 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR31920:SF18 - B3 DOMAIN-CONTAINING PROTEIN REM19-RELATED Description:  B3 domain transcription factor VRN1-like protein
Genomic Order:  1663 Name:  ? Medtr1g034240
Secondary Identifier:  ? PAC:31093750
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g034240 0.5kb upstream 0.5kb upstream 4429 true chr1: 12441970-12446398 Medicago truncatula
Medtr1g034240 0.5kb upstream 0.5kb upstream 500 false chr1: 12441970-12442469 Medicago truncatula
Medtr1g034240 0.5kb downstream 0.5kb downstream 4429 true chr1: 12442470-12446898 Medicago truncatula
Medtr1g034240 0.5kb downstream 0.5kb downstream 500 false chr1: 12446399-12446898 Medicago truncatula
Medtr1g034240 1.0kb upstream 1.0kb upstream 4929 true chr1: 12441470-12446398 Medicago truncatula
Medtr1g034240 1.0kb upstream 1.0kb upstream 1000 false chr1: 12441470-12442469 Medicago truncatula
Medtr1g034240 1.0kb downstream 1.0kb downstream 4929 true chr1: 12442470-12447398 Medicago truncatula
Medtr1g034240 1.0kb downstream 1.0kb downstream 1000 false chr1: 12446399-12447398 Medicago truncatula
Medtr1g034240 2.0kb upstream 2.0kb upstream 5929 true chr1: 12440470-12446398 Medicago truncatula
Medtr1g034240 2.0kb upstream 2.0kb upstream 2000 false chr1: 12440470-12442469 Medicago truncatula
Medtr1g034240 2.0kb downstream 2.0kb downstream 5929 true chr1: 12442470-12448398 Medicago truncatula
Medtr1g034240 2.0kb downstream 2.0kb downstream 2000 false chr1: 12446399-12448398 Medicago truncatula
Medtr1g034240 5.0kb upstream 5.0kb upstream 8929 true chr1: 12437470-12446398 Medicago truncatula
Medtr1g034240 5.0kb upstream 5.0kb upstream 5000 false chr1: 12437470-12442469 Medicago truncatula
Medtr1g034240 5.0kb downstream 5.0kb downstream 8929 true chr1: 12442470-12451398 Medicago truncatula
Medtr1g034240 5.0kb downstream 5.0kb downstream 5000 false chr1: 12446399-12451398 Medicago truncatula
Medtr1g034240 10.0kb upstream 10.0kb upstream 13929 true chr1: 12432470-12446398 Medicago truncatula
Medtr1g034240 10.0kb upstream 10.0kb upstream 10000 false chr1: 12432470-12442469 Medicago truncatula
Medtr1g034240 10.0kb downstream 10.0kb downstream 13929 true chr1: 12442470-12456398 Medicago truncatula
Medtr1g034240 10.0kb downstream 10.0kb downstream 10000 false chr1: 12446399-12456398 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309296 5265 Fabidae View MSA
124073823 5270 Rosid View MSA
123753418 5271 Pentapetalae View MSA
122797829 5272 Eudicot View MSA
122050133 5273 Angiosperm View MSA
121350826 5274 Embryophyte View MSA
123427153 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.549     High  
cufflinks 8.858       Low
cufflinks 12.923     High  
cufflinks 22.754     High  
cufflinks 11.377     High  
cufflinks 11.965     High  
cufflinks 25.814     High High
cufflinks 9.67     High Low
cufflinks 23.467     High High

0 Strain