Gene : Medtr1g035700 M. truncatula Mt4.0v1
Defline:  (1 of 3) PF12579 - Protein of unknown function (DUF3755) (DUF3755) Description:  homeodomain transcription factor superfamily protein, putative
Genomic Order:  1734 Name:  ? Medtr1g035700
Secondary Identifier:  ? PAC:31100183
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g035700 0.5kb upstream 0.5kb upstream 8384 true chr1: 13029929-13038312 Medicago truncatula
Medtr1g035700 0.5kb upstream 0.5kb upstream 500 false chr1: 13029929-13030428 Medicago truncatula
Medtr1g035700 0.5kb downstream 0.5kb downstream 8384 true chr1: 13030429-13038812 Medicago truncatula
Medtr1g035700 0.5kb downstream 0.5kb downstream 500 false chr1: 13038313-13038812 Medicago truncatula
Medtr1g035700 1.0kb upstream 1.0kb upstream 8884 true chr1: 13029429-13038312 Medicago truncatula
Medtr1g035700 1.0kb upstream 1.0kb upstream 1000 false chr1: 13029429-13030428 Medicago truncatula
Medtr1g035700 1.0kb downstream 1.0kb downstream 8884 true chr1: 13030429-13039312 Medicago truncatula
Medtr1g035700 1.0kb downstream 1.0kb downstream 1000 false chr1: 13038313-13039312 Medicago truncatula
Medtr1g035700 2.0kb upstream 2.0kb upstream 9884 true chr1: 13028429-13038312 Medicago truncatula
Medtr1g035700 2.0kb upstream 2.0kb upstream 2000 false chr1: 13028429-13030428 Medicago truncatula
Medtr1g035700 2.0kb downstream 2.0kb downstream 9884 true chr1: 13030429-13040312 Medicago truncatula
Medtr1g035700 2.0kb downstream 2.0kb downstream 2000 false chr1: 13038313-13040312 Medicago truncatula
Medtr1g035700 5.0kb upstream 5.0kb upstream 12884 true chr1: 13025429-13038312 Medicago truncatula
Medtr1g035700 5.0kb upstream 5.0kb upstream 5000 false chr1: 13025429-13030428 Medicago truncatula
Medtr1g035700 5.0kb downstream 5.0kb downstream 12884 true chr1: 13030429-13043312 Medicago truncatula
Medtr1g035700 5.0kb downstream 5.0kb downstream 5000 false chr1: 13038313-13043312 Medicago truncatula
Medtr1g035700 10.0kb upstream 10.0kb upstream 17884 true chr1: 13020429-13038312 Medicago truncatula
Medtr1g035700 10.0kb upstream 10.0kb upstream 10000 false chr1: 13020429-13030428 Medicago truncatula
Medtr1g035700 10.0kb downstream 10.0kb downstream 17884 true chr1: 13030429-13048312 Medicago truncatula
Medtr1g035700 10.0kb downstream 10.0kb downstream 10000 false chr1: 13038313-13048312 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297993 5265 Fabidae View MSA
124060862 5270 Rosid View MSA
123751212 5271 Pentapetalae View MSA
122789009 5272 Eudicot View MSA
122047918 5273 Angiosperm View MSA
121349043 5274 Embryophyte View MSA
123381139 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.11       Low
cufflinks 0.48        
cufflinks 0.613       High
cufflinks 0.111       Low
cufflinks 0.856       High
cufflinks 0.129     Low  
cufflinks 0.23        
cufflinks 0.479        
cufflinks 0.15        

0 Strain