Gene : Medtr1g035360 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11071:SF200 - CYCLOPHILIN-LIKE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FAMILY PROTEIN-RELATED Description:  peptidyl-prolyl cis-trans isomerase
Genomic Order:  1710 Name:  ? Medtr1g035360
Secondary Identifier:  ? PAC:31098156
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g035360 0.5kb upstream 0.5kb upstream 3703 true chr1: 12833958-12837660 Medicago truncatula
Medtr1g035360 0.5kb upstream 0.5kb upstream 500 false chr1: 12837161-12837660 Medicago truncatula
Medtr1g035360 0.5kb downstream 0.5kb downstream 3703 true chr1: 12833458-12837160 Medicago truncatula
Medtr1g035360 0.5kb downstream 0.5kb downstream 500 false chr1: 12833458-12833957 Medicago truncatula
Medtr1g035360 1.0kb upstream 1.0kb upstream 4203 true chr1: 12833958-12838160 Medicago truncatula
Medtr1g035360 1.0kb upstream 1.0kb upstream 1000 false chr1: 12837161-12838160 Medicago truncatula
Medtr1g035360 1.0kb downstream 1.0kb downstream 4203 true chr1: 12832958-12837160 Medicago truncatula
Medtr1g035360 1.0kb downstream 1.0kb downstream 1000 false chr1: 12832958-12833957 Medicago truncatula
Medtr1g035360 2.0kb upstream 2.0kb upstream 5203 true chr1: 12833958-12839160 Medicago truncatula
Medtr1g035360 2.0kb upstream 2.0kb upstream 2000 false chr1: 12837161-12839160 Medicago truncatula
Medtr1g035360 2.0kb downstream 2.0kb downstream 5203 true chr1: 12831958-12837160 Medicago truncatula
Medtr1g035360 2.0kb downstream 2.0kb downstream 2000 false chr1: 12831958-12833957 Medicago truncatula
Medtr1g035360 5.0kb upstream 5.0kb upstream 8203 true chr1: 12833958-12842160 Medicago truncatula
Medtr1g035360 5.0kb upstream 5.0kb upstream 5000 false chr1: 12837161-12842160 Medicago truncatula
Medtr1g035360 5.0kb downstream 5.0kb downstream 8203 true chr1: 12828958-12837160 Medicago truncatula
Medtr1g035360 5.0kb downstream 5.0kb downstream 5000 false chr1: 12828958-12833957 Medicago truncatula
Medtr1g035360 10.0kb upstream 10.0kb upstream 13203 true chr1: 12833958-12847160 Medicago truncatula
Medtr1g035360 10.0kb upstream 10.0kb upstream 10000 false chr1: 12837161-12847160 Medicago truncatula
Medtr1g035360 10.0kb downstream 10.0kb downstream 13203 true chr1: 12823958-12837160 Medicago truncatula
Medtr1g035360 10.0kb downstream 10.0kb downstream 10000 false chr1: 12823958-12833957 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296591 5265 Fabidae View MSA
124066155 5270 Rosid View MSA
123744610 5271 Pentapetalae View MSA
122791251 5272 Eudicot View MSA
122046189 5273 Angiosperm View MSA
123428973 5275 Viridiplantae View MSA
121350485 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.041     Low  
cufflinks 0.023     Low Low
cufflinks 0.239        
cufflinks 0.49       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.114        
cufflinks 0.09        
cufflinks 0.364        

0 Strain