Gene : Medtr1g034960 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13871:SF43 - CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN Description:  cysteine/histidine-rich C1 domain protein
Genomic Order:  1700 Name:  ? Medtr1g034960
Secondary Identifier:  ? PAC:31094006
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g034960 0.5kb upstream 0.5kb upstream 4374 true chr1: 12719361-12723734 Medicago truncatula
Medtr1g034960 0.5kb upstream 0.5kb upstream 500 false chr1: 12723235-12723734 Medicago truncatula
Medtr1g034960 0.5kb downstream 0.5kb downstream 4374 true chr1: 12718861-12723234 Medicago truncatula
Medtr1g034960 0.5kb downstream 0.5kb downstream 500 false chr1: 12718861-12719360 Medicago truncatula
Medtr1g034960 1.0kb upstream 1.0kb upstream 4874 true chr1: 12719361-12724234 Medicago truncatula
Medtr1g034960 1.0kb upstream 1.0kb upstream 1000 false chr1: 12723235-12724234 Medicago truncatula
Medtr1g034960 1.0kb downstream 1.0kb downstream 4874 true chr1: 12718361-12723234 Medicago truncatula
Medtr1g034960 1.0kb downstream 1.0kb downstream 1000 false chr1: 12718361-12719360 Medicago truncatula
Medtr1g034960 2.0kb upstream 2.0kb upstream 5874 true chr1: 12719361-12725234 Medicago truncatula
Medtr1g034960 2.0kb upstream 2.0kb upstream 2000 false chr1: 12723235-12725234 Medicago truncatula
Medtr1g034960 2.0kb downstream 2.0kb downstream 5874 true chr1: 12717361-12723234 Medicago truncatula
Medtr1g034960 2.0kb downstream 2.0kb downstream 2000 false chr1: 12717361-12719360 Medicago truncatula
Medtr1g034960 5.0kb upstream 5.0kb upstream 8874 true chr1: 12719361-12728234 Medicago truncatula
Medtr1g034960 5.0kb upstream 5.0kb upstream 5000 false chr1: 12723235-12728234 Medicago truncatula
Medtr1g034960 5.0kb downstream 5.0kb downstream 8874 true chr1: 12714361-12723234 Medicago truncatula
Medtr1g034960 5.0kb downstream 5.0kb downstream 5000 false chr1: 12714361-12719360 Medicago truncatula
Medtr1g034960 10.0kb upstream 10.0kb upstream 13874 true chr1: 12719361-12733234 Medicago truncatula
Medtr1g034960 10.0kb upstream 10.0kb upstream 10000 false chr1: 12723235-12733234 Medicago truncatula
Medtr1g034960 10.0kb downstream 10.0kb downstream 13874 true chr1: 12709361-12723234 Medicago truncatula
Medtr1g034960 10.0kb downstream 10.0kb downstream 10000 false chr1: 12709361-12719360 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307284 5265 Fabidae View MSA
124061388 5270 Rosid View MSA
123737887 5271 Pentapetalae View MSA
122796546 5272 Eudicot View MSA
122051127 5273 Angiosperm View MSA
121351229 5274 Embryophyte View MSA
123382066 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.03     Low Low
cufflinks 0.551        
cufflinks 0.309        
cufflinks 0.214        
cufflinks 0.44        
cufflinks 0.294        
cufflinks 0.889        
cufflinks 0.261        
cufflinks 1.152       High

0 Strain