Gene : Medtr1g073860 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR31100:SF3 - AT-HOOK MOTIF NUCLEAR LOCALIZED PROTEIN 19-RELATED Description:  AT hook motif DNA-binding family protein
Genomic Order:  3970 Name:  ? Medtr1g073860
Secondary Identifier:  ? PAC:31096913
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g073860 0.5kb upstream 0.5kb upstream 3018 true chr1: 32802541-32805558 Medicago truncatula
Medtr1g073860 0.5kb upstream 0.5kb upstream 500 false chr1: 32805059-32805558 Medicago truncatula
Medtr1g073860 0.5kb downstream 0.5kb downstream 3018 true chr1: 32802041-32805058 Medicago truncatula
Medtr1g073860 0.5kb downstream 0.5kb downstream 500 false chr1: 32802041-32802540 Medicago truncatula
Medtr1g073860 1.0kb upstream 1.0kb upstream 3518 true chr1: 32802541-32806058 Medicago truncatula
Medtr1g073860 1.0kb upstream 1.0kb upstream 1000 false chr1: 32805059-32806058 Medicago truncatula
Medtr1g073860 1.0kb downstream 1.0kb downstream 3518 true chr1: 32801541-32805058 Medicago truncatula
Medtr1g073860 1.0kb downstream 1.0kb downstream 1000 false chr1: 32801541-32802540 Medicago truncatula
Medtr1g073860 2.0kb upstream 2.0kb upstream 4518 true chr1: 32802541-32807058 Medicago truncatula
Medtr1g073860 2.0kb upstream 2.0kb upstream 2000 false chr1: 32805059-32807058 Medicago truncatula
Medtr1g073860 2.0kb downstream 2.0kb downstream 4518 true chr1: 32800541-32805058 Medicago truncatula
Medtr1g073860 2.0kb downstream 2.0kb downstream 2000 false chr1: 32800541-32802540 Medicago truncatula
Medtr1g073860 5.0kb upstream 5.0kb upstream 7518 true chr1: 32802541-32810058 Medicago truncatula
Medtr1g073860 5.0kb upstream 5.0kb upstream 5000 false chr1: 32805059-32810058 Medicago truncatula
Medtr1g073860 5.0kb downstream 5.0kb downstream 7518 true chr1: 32797541-32805058 Medicago truncatula
Medtr1g073860 5.0kb downstream 5.0kb downstream 5000 false chr1: 32797541-32802540 Medicago truncatula
Medtr1g073860 10.0kb upstream 10.0kb upstream 12518 true chr1: 32802541-32815058 Medicago truncatula
Medtr1g073860 10.0kb upstream 10.0kb upstream 10000 false chr1: 32805059-32815058 Medicago truncatula
Medtr1g073860 10.0kb downstream 10.0kb downstream 12518 true chr1: 32792541-32805058 Medicago truncatula
Medtr1g073860 10.0kb downstream 10.0kb downstream 10000 false chr1: 32792541-32802540 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297655 5265 Fabidae View MSA
124071129 5270 Rosid View MSA
123751689 5271 Pentapetalae View MSA
122796160 5272 Eudicot View MSA
122048201 5273 Angiosperm View MSA
121348557 5274 Embryophyte View MSA
123380913 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.044     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low Low
cufflinks 18.387     High  
cufflinks 0.005     Low Low
cufflinks 5.631        
cufflinks 9.603        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 11.028     High  

0 Strain