Gene : Medtr1g073740 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13301//PTHR13301:SF41 - X-BOX TRANSCRIPTION FACTOR-RELATED Description:  cellulose synthase-like protein D3
Genomic Order:  3963 Name:  ? Medtr1g073740
Secondary Identifier:  ? PAC:31095999
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-1001 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g073740 0.5kb upstream 0.5kb upstream 4850 true chr1: 32719579-32724428 Medicago truncatula
Medtr1g073740 0.5kb upstream 0.5kb upstream 500 false chr1: 32723929-32724428 Medicago truncatula
Medtr1g073740 0.5kb downstream 0.5kb downstream 4850 true chr1: 32719079-32723928 Medicago truncatula
Medtr1g073740 0.5kb downstream 0.5kb downstream 500 false chr1: 32719079-32719578 Medicago truncatula
Medtr1g073740 1.0kb upstream 1.0kb upstream 5350 true chr1: 32719579-32724928 Medicago truncatula
Medtr1g073740 1.0kb upstream 1.0kb upstream 1000 false chr1: 32723929-32724928 Medicago truncatula
Medtr1g073740 1.0kb downstream 1.0kb downstream 5350 true chr1: 32718579-32723928 Medicago truncatula
Medtr1g073740 1.0kb downstream 1.0kb downstream 1000 false chr1: 32718579-32719578 Medicago truncatula
Medtr1g073740 2.0kb upstream 2.0kb upstream 6350 true chr1: 32719579-32725928 Medicago truncatula
Medtr1g073740 2.0kb upstream 2.0kb upstream 2000 false chr1: 32723929-32725928 Medicago truncatula
Medtr1g073740 2.0kb downstream 2.0kb downstream 6350 true chr1: 32717579-32723928 Medicago truncatula
Medtr1g073740 2.0kb downstream 2.0kb downstream 2000 false chr1: 32717579-32719578 Medicago truncatula
Medtr1g073740 5.0kb upstream 5.0kb upstream 9350 true chr1: 32719579-32728928 Medicago truncatula
Medtr1g073740 5.0kb upstream 5.0kb upstream 5000 false chr1: 32723929-32728928 Medicago truncatula
Medtr1g073740 5.0kb downstream 5.0kb downstream 9350 true chr1: 32714579-32723928 Medicago truncatula
Medtr1g073740 5.0kb downstream 5.0kb downstream 5000 false chr1: 32714579-32719578 Medicago truncatula
Medtr1g073740 10.0kb upstream 10.0kb upstream 14350 true chr1: 32719579-32733928 Medicago truncatula
Medtr1g073740 10.0kb upstream 10.0kb upstream 10000 false chr1: 32723929-32733928 Medicago truncatula
Medtr1g073740 10.0kb downstream 10.0kb downstream 14350 true chr1: 32709579-32723928 Medicago truncatula
Medtr1g073740 10.0kb downstream 10.0kb downstream 10000 false chr1: 32709579-32719578 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309823 5265 Fabidae View MSA
124070260 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 147.209     High High
cufflinks 58.482     High  
cufflinks 14.283     High  
cufflinks 9.506     High Low
cufflinks 17.96     High  
cufflinks 14.175     High  
cufflinks 25.716     High  
cufflinks 74.525     High High
cufflinks 10.162        

0 Strain