Gene : Medtr1g073790 M. truncatula Mt4.0v1
Defline:  (1 of 16) PF00917 - MATH domain (MATH) Description:  meprin and TRAF (MATH)-like domain protein
Genomic Order:  3967 Name:  ? Medtr1g073790
Secondary Identifier:  ? PAC:31099605
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g073790 0.5kb upstream 0.5kb upstream 13656 true chr1: 32746070-32759725 Medicago truncatula
Medtr1g073790 0.5kb upstream 0.5kb upstream 500 false chr1: 32759226-32759725 Medicago truncatula
Medtr1g073790 0.5kb downstream 0.5kb downstream 13656 true chr1: 32745570-32759225 Medicago truncatula
Medtr1g073790 0.5kb downstream 0.5kb downstream 500 false chr1: 32745570-32746069 Medicago truncatula
Medtr1g073790 1.0kb upstream 1.0kb upstream 14156 true chr1: 32746070-32760225 Medicago truncatula
Medtr1g073790 1.0kb upstream 1.0kb upstream 1000 false chr1: 32759226-32760225 Medicago truncatula
Medtr1g073790 1.0kb downstream 1.0kb downstream 14156 true chr1: 32745070-32759225 Medicago truncatula
Medtr1g073790 1.0kb downstream 1.0kb downstream 1000 false chr1: 32745070-32746069 Medicago truncatula
Medtr1g073790 2.0kb upstream 2.0kb upstream 15156 true chr1: 32746070-32761225 Medicago truncatula
Medtr1g073790 2.0kb upstream 2.0kb upstream 2000 false chr1: 32759226-32761225 Medicago truncatula
Medtr1g073790 2.0kb downstream 2.0kb downstream 15156 true chr1: 32744070-32759225 Medicago truncatula
Medtr1g073790 2.0kb downstream 2.0kb downstream 2000 false chr1: 32744070-32746069 Medicago truncatula
Medtr1g073790 5.0kb upstream 5.0kb upstream 18156 true chr1: 32746070-32764225 Medicago truncatula
Medtr1g073790 5.0kb upstream 5.0kb upstream 5000 false chr1: 32759226-32764225 Medicago truncatula
Medtr1g073790 5.0kb downstream 5.0kb downstream 18156 true chr1: 32741070-32759225 Medicago truncatula
Medtr1g073790 5.0kb downstream 5.0kb downstream 5000 false chr1: 32741070-32746069 Medicago truncatula
Medtr1g073790 10.0kb upstream 10.0kb upstream 23156 true chr1: 32746070-32769225 Medicago truncatula
Medtr1g073790 10.0kb upstream 10.0kb upstream 10000 false chr1: 32759226-32769225 Medicago truncatula
Medtr1g073790 10.0kb downstream 10.0kb downstream 23156 true chr1: 32736070-32759225 Medicago truncatula
Medtr1g073790 10.0kb downstream 10.0kb downstream 10000 false chr1: 32736070-32746069 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312741 5265 Fabidae View MSA
124063906 5270 Rosid View MSA
123740151 5271 Pentapetalae View MSA
122794933 5272 Eudicot View MSA
122043519 5273 Angiosperm View MSA
121350769 5274 Embryophyte View MSA
123425613 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.557       High
cufflinks 2.64        
cufflinks 4.491        
cufflinks 1.71       Low
cufflinks 2.593        
cufflinks 1.315       Low
cufflinks 3.834        
cufflinks 3.654        
cufflinks 2.934        

0 Strain