Gene : Medtr1g073530 M. truncatula Mt4.0v1
Defline:  (1 of 19) PF01388 - ARID/BRIGHT DNA binding domain (ARID) Description:  ARID/bright DNA-binding domain protein
Genomic Order:  3946 Name:  ? Medtr1g073530
Secondary Identifier:  ? PAC:31098451
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g073530 0.5kb upstream 0.5kb upstream 3250 true chr1: 32631245-32634494 Medicago truncatula
Medtr1g073530 0.5kb upstream 0.5kb upstream 500 false chr1: 32633995-32634494 Medicago truncatula
Medtr1g073530 0.5kb downstream 0.5kb downstream 3250 true chr1: 32630745-32633994 Medicago truncatula
Medtr1g073530 0.5kb downstream 0.5kb downstream 500 false chr1: 32630745-32631244 Medicago truncatula
Medtr1g073530 1.0kb upstream 1.0kb upstream 3750 true chr1: 32631245-32634994 Medicago truncatula
Medtr1g073530 1.0kb upstream 1.0kb upstream 1000 false chr1: 32633995-32634994 Medicago truncatula
Medtr1g073530 1.0kb downstream 1.0kb downstream 3750 true chr1: 32630245-32633994 Medicago truncatula
Medtr1g073530 1.0kb downstream 1.0kb downstream 1000 false chr1: 32630245-32631244 Medicago truncatula
Medtr1g073530 2.0kb upstream 2.0kb upstream 4750 true chr1: 32631245-32635994 Medicago truncatula
Medtr1g073530 2.0kb upstream 2.0kb upstream 2000 false chr1: 32633995-32635994 Medicago truncatula
Medtr1g073530 2.0kb downstream 2.0kb downstream 4750 true chr1: 32629245-32633994 Medicago truncatula
Medtr1g073530 2.0kb downstream 2.0kb downstream 2000 false chr1: 32629245-32631244 Medicago truncatula
Medtr1g073530 5.0kb upstream 5.0kb upstream 7750 true chr1: 32631245-32638994 Medicago truncatula
Medtr1g073530 5.0kb upstream 5.0kb upstream 5000 false chr1: 32633995-32638994 Medicago truncatula
Medtr1g073530 5.0kb downstream 5.0kb downstream 7750 true chr1: 32626245-32633994 Medicago truncatula
Medtr1g073530 5.0kb downstream 5.0kb downstream 5000 false chr1: 32626245-32631244 Medicago truncatula
Medtr1g073530 10.0kb upstream 10.0kb upstream 12750 true chr1: 32631245-32643994 Medicago truncatula
Medtr1g073530 10.0kb upstream 10.0kb upstream 10000 false chr1: 32633995-32643994 Medicago truncatula
Medtr1g073530 10.0kb downstream 10.0kb downstream 12750 true chr1: 32621245-32633994 Medicago truncatula
Medtr1g073530 10.0kb downstream 10.0kb downstream 10000 false chr1: 32621245-32631244 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301307 5265 Fabidae View MSA
124068445 5270 Rosid View MSA
123753441 5271 Pentapetalae View MSA
122795804 5272 Eudicot View MSA
122049441 5273 Angiosperm View MSA
121348389 5274 Embryophyte View MSA
123380842 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.444       High
cufflinks 0.154        
cufflinks 0.341        
cufflinks 0.033     Low Low
cufflinks 0.366        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.051     Low  
cufflinks 0.215        
cufflinks 0.053     Low  

0 Strain