Gene : Medtr1g076190 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR11455:SF24 - CRYPTOCHROME-1 Description:  cryptochrome 2B apoprotein
Genomic Order:  4103 Name:  ? Medtr1g076190
Secondary Identifier:  ? PAC:31096201
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g076190 0.5kb upstream 0.5kb upstream 4411 true chr1: 33756438-33760848 Medicago truncatula
Medtr1g076190 0.5kb upstream 0.5kb upstream 500 false chr1: 33756438-33756937 Medicago truncatula
Medtr1g076190 0.5kb downstream 0.5kb downstream 4411 true chr1: 33756938-33761348 Medicago truncatula
Medtr1g076190 0.5kb downstream 0.5kb downstream 500 false chr1: 33760849-33761348 Medicago truncatula
Medtr1g076190 1.0kb upstream 1.0kb upstream 4911 true chr1: 33755938-33760848 Medicago truncatula
Medtr1g076190 1.0kb upstream 1.0kb upstream 1000 false chr1: 33755938-33756937 Medicago truncatula
Medtr1g076190 1.0kb downstream 1.0kb downstream 4911 true chr1: 33756938-33761848 Medicago truncatula
Medtr1g076190 1.0kb downstream 1.0kb downstream 1000 false chr1: 33760849-33761848 Medicago truncatula
Medtr1g076190 2.0kb upstream 2.0kb upstream 5911 true chr1: 33754938-33760848 Medicago truncatula
Medtr1g076190 2.0kb upstream 2.0kb upstream 2000 false chr1: 33754938-33756937 Medicago truncatula
Medtr1g076190 2.0kb downstream 2.0kb downstream 5911 true chr1: 33756938-33762848 Medicago truncatula
Medtr1g076190 2.0kb downstream 2.0kb downstream 2000 false chr1: 33760849-33762848 Medicago truncatula
Medtr1g076190 5.0kb upstream 5.0kb upstream 8911 true chr1: 33751938-33760848 Medicago truncatula
Medtr1g076190 5.0kb upstream 5.0kb upstream 5000 false chr1: 33751938-33756937 Medicago truncatula
Medtr1g076190 5.0kb downstream 5.0kb downstream 8911 true chr1: 33756938-33765848 Medicago truncatula
Medtr1g076190 5.0kb downstream 5.0kb downstream 5000 false chr1: 33760849-33765848 Medicago truncatula
Medtr1g076190 10.0kb upstream 10.0kb upstream 13911 true chr1: 33746938-33760848 Medicago truncatula
Medtr1g076190 10.0kb upstream 10.0kb upstream 10000 false chr1: 33746938-33756937 Medicago truncatula
Medtr1g076190 10.0kb downstream 10.0kb downstream 13911 true chr1: 33756938-33770848 Medicago truncatula
Medtr1g076190 10.0kb downstream 10.0kb downstream 10000 false chr1: 33760849-33770848 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306524 5265 Fabidae View MSA
124066295 5270 Rosid View MSA
123738147 5271 Pentapetalae View MSA
122792892 5272 Eudicot View MSA
122048329 5273 Angiosperm View MSA
121343845 5274 Embryophyte View MSA
123428792 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.062     High  
cufflinks 26.399     High  
cufflinks 31.775     High High
cufflinks 7.976       Low
cufflinks 26.88     High  
cufflinks 5.705       Low
cufflinks 18.436     High  
cufflinks 31.217     High  
cufflinks 12.163     High  

0 Strain