Gene : Medtr1g087790 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13464 - TRANSCRIPTIONAL REGULATOR PROTEIN HCNGP Description:  transcriptional regulator family protein, putative
Genomic Order:  4840 Name:  ? Medtr1g087790
Secondary Identifier:  ? PAC:31093894
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr1g087790 0.5kb upstream 0.5kb upstream 5985 true chr1: 39288071-39294055 Medicago truncatula
Medtr1g087790 0.5kb upstream 0.5kb upstream 500 false chr1: 39288071-39288570 Medicago truncatula
Medtr1g087790 0.5kb downstream 0.5kb downstream 5985 true chr1: 39288571-39294555 Medicago truncatula
Medtr1g087790 0.5kb downstream 0.5kb downstream 500 false chr1: 39294056-39294555 Medicago truncatula
Medtr1g087790 1.0kb upstream 1.0kb upstream 6485 true chr1: 39287571-39294055 Medicago truncatula
Medtr1g087790 1.0kb upstream 1.0kb upstream 1000 false chr1: 39287571-39288570 Medicago truncatula
Medtr1g087790 1.0kb downstream 1.0kb downstream 6485 true chr1: 39288571-39295055 Medicago truncatula
Medtr1g087790 1.0kb downstream 1.0kb downstream 1000 false chr1: 39294056-39295055 Medicago truncatula
Medtr1g087790 2.0kb upstream 2.0kb upstream 7485 true chr1: 39286571-39294055 Medicago truncatula
Medtr1g087790 2.0kb upstream 2.0kb upstream 2000 false chr1: 39286571-39288570 Medicago truncatula
Medtr1g087790 2.0kb downstream 2.0kb downstream 7485 true chr1: 39288571-39296055 Medicago truncatula
Medtr1g087790 2.0kb downstream 2.0kb downstream 2000 false chr1: 39294056-39296055 Medicago truncatula
Medtr1g087790 5.0kb upstream 5.0kb upstream 10485 true chr1: 39283571-39294055 Medicago truncatula
Medtr1g087790 5.0kb upstream 5.0kb upstream 5000 false chr1: 39283571-39288570 Medicago truncatula
Medtr1g087790 5.0kb downstream 5.0kb downstream 10485 true chr1: 39288571-39299055 Medicago truncatula
Medtr1g087790 5.0kb downstream 5.0kb downstream 5000 false chr1: 39294056-39299055 Medicago truncatula
Medtr1g087790 10.0kb upstream 10.0kb upstream 15485 true chr1: 39278571-39294055 Medicago truncatula
Medtr1g087790 10.0kb upstream 10.0kb upstream 10000 false chr1: 39278571-39288570 Medicago truncatula
Medtr1g087790 10.0kb downstream 10.0kb downstream 15485 true chr1: 39288571-39304055 Medicago truncatula
Medtr1g087790 10.0kb downstream 10.0kb downstream 10000 false chr1: 39294056-39304055 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304244 5265 Fabidae View MSA
124067157 5270 Rosid View MSA
123739885 5271 Pentapetalae View MSA
122794219 5272 Eudicot View MSA
122042858 5273 Angiosperm View MSA
123429181 5275 Viridiplantae View MSA
121344834 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.53        
cufflinks 2.126        
cufflinks 2.552        
cufflinks 2.285        
cufflinks 2.207        
cufflinks 1.266       Low
cufflinks 2.938       High
cufflinks 2.257        
cufflinks 2.096        

0 Strain